Gene Information

Name : Toce_0555 (Toce_0555)
Accession : YP_003824951.1
Strain : Thermosediminibacter oceani DSM 16646
Genome accession: NC_014377
Putative virulence/resistance : Virulence
Product : propanediol utilization protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4869
EC number : -
Position : 569494 - 570135 bp
Length : 642 bp
Strand : +
Note : COGs: COG4869 Propanediol utilization protein; InterPro IPR008300; KEGG: tex:Teth514_1947 propanediol utilization protein; PFAM: Propanediol utilization protein; SPTR: Propanediol utilization protein; PFAM: Propanediol utilisation protein PduL

DNA sequence : 
GTGCTGGACGATTTGGACCTAAAGGAAATAGTGCAAAAGGTCAAGGAAAAGTTATCGGAGATGAGCGGATATCCAAAAGT
CACCATCAATGTTTCGGCAAGGCATGTGCACCTTTCGAGTGAGCACCTGGAAATACTGTTCGGCAAAAATTATAGGCTTT
CCCCCTTGAGGGAACTGATGCAGCCCGGGGAATTCGCTGCCAAAGAGACGGTCATAATAGTAGGCCCCAAGGGGATTATT
CAGAACGTGAGGGTTTTGGGCCCCGTTAGAAAAAAGACCCAGGTGGAGATTTCAAAAACCGATGGTTTTGTCCTGGGGAT
CGACCCTGTCGTGAGGGATTCGGGAAATCATGAGGGTTCTTCGGGGTGCGTCCTGGTGGGGCCCGCCGGCGGTGTCAGGA
TCGAGGAAGGAGTCATAGCAGCCATGAGGCACATACACATGCCGGTTCAGTTTGCGGAAAAGTACGGGATTAAGGACAGG
AGTTTTTTAAAGGTTCTGGTGGAGGGCGAAAGGAAGGTGGTCTTCGACAGGGTGCTTGCCAGGGTTTCCGACAATTTCGC
CCTCGAGATGCACATCGATACCGACGAAGCCAACGCTGCCGGAGTCAGGAGCGGGGACAAGGGTTTTATACTTCTGGAAT
GA

Protein sequence : 
MLDDLDLKEIVQKVKEKLSEMSGYPKVTINVSARHVHLSSEHLEILFGKNYRLSPLRELMQPGEFAAKETVIIVGPKGII
QNVRVLGPVRKKTQVEISKTDGFVLGIDPVVRDSGNHEGSSGCVLVGPAGGVRIEEGVIAAMRHIHMPVQFAEKYGIKDR
SFLKVLVEGERKVVFDRVLARVSDNFALEMHIDTDEANAAGVRSGDKGFILLE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42070.1 hypothetical protein Not tested PAI II 536 Protein 7e-42 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Toce_0555 YP_003824951.1 propanediol utilization protein VFG1589 Protein 3e-42 48