Gene Information

Name : Acear_1983 (Acear_1983)
Accession : YP_003828545.1
Strain : Acetohalobium arabaticum DSM 5501
Genome accession: NC_014378
Putative virulence/resistance : Unknown
Product : cold-shock DNA-binding protein family
Function : -
COG functional category : K : Transcription
COG ID : COG1278
EC number : -
Position : 2089538 - 2089741 bp
Length : 204 bp
Strand : +
Note : COGs: COG1278 Cold shock protein; InterProIPR019844:IPR002059:IPR016027:IPR012340:IPR 012156:IPR011129; KEGG: hor:Hore_16470 cold-shock DNA-binding domain protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; SPTR: B8CYM7 Putative cold

DNA sequence :
GTGATTTTATCAGGAACAGTAAAGTGGTTTGATTCTAACAAAGGTTTTGGATTTATTGAGCGACCAGACGAGGACGATGT
ATTTGTACATTATTCTGCAATTGCAGAAGACGGTTTCAAGGACTTAGACGAAGGTGCAGAAGTTGAATTTGAAGTAGTAG
AAGGAGAAAAAGGTCCTCAAGCTGAAAATGTAGTTAAATTATAA

Protein sequence :
MILSGTVKWFDSNKGFGFIERPDEDDVFVHYSAIAEDGFKDLDEGAEVEFEVVEGEKGPQAENVVKL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18076.1 unknown Not tested TTSS locus Protein 2e-08 57