Gene Information

Name : COB47_1830 (COB47_1830)
Accession : YP_003841092.1
Strain : Caldicellulosiruptor obsidiansis OB47
Genome accession: NC_014392
Putative virulence/resistance : Unknown
Product : transketolase central region
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG3958
EC number : -
Position : 1971265 - 1972206 bp
Length : 942 bp
Strand : -
Note : PFAM: Transketolase central region; Transketolase domain-containing protein; KEGG: csc:Csac_1352 transketolase, central region

DNA sequence : 
ATGGCAAAAATAGCAACAAGAGAGGCATATGGTCAGGCATTGGCTGAGTTTGGGGAAATATATAAAAATATTGTTGTGCT
TGATGCTGACCTTTCAAAATCAACAAGGACAGAAATTTTCAAGAAAAAGTTTCCTGAAAGGTTTTTCAATATAGGAATTG
CAGAACAGGACCTCATGGCAACAGCAGCAGGATTTGCAACATGTGGCAAAATTCCTTTTGCAAGTACATTTGCGGTCTTT
GCTGCTGGAAGAGCTTATGACCAGGTGAGAAATTCAATAGGTTATCCACACTTAAATGTAAAGATTGGAGCCTCACATGC
AGGTGTGTCAATCGGCGAAGATGGTGCATCCCATCAGATGCTTGAAGATATAGCATTGATGAGGGTTATCCCTGGCATGG
TAGTATTATCACCTGCTGATGCGACATCAACTTATGAGTGTGTAAGACTTGCGATTGAGCATGAAGGACCTGTTTATATT
CGTTTGGGCAGGCTTGGTGTTGAGGAAATTTACAAAAAAGGAGAGCTGAAGCTTACTCTTGGCAAAGGTATTGTTCTTCA
AAAAGGGAAAGATGTTGGTATTTTGGCAACAGGACTTATGGTACATGAAGCTATAAAGGCAGCAAAAATGCTTCAGGATG
AAGGTGTTTCGGTATATCTTGTTGATATGCCATGCATAAAACCAATTGATGTTGATTTGATTTTAGATGTGGCAAAGATA
ACTGGCTGCATTGTCACAGCAGAAGAGCACAATATCTTAGGCGGTTTTGGAAGTGCTGTTTCTGAGGTTTTGGCTCAAAA
CTATCCTGTACCGGTAAAAATGGTTGGTGTAAATGATGAGTTTGGAAGGTCAGGAAAGCCTGAGGATGTTCTCAAATATT
ACAAGCTCACAGCAGAGGAGATTGTCAACAAAGCAAAAGAAGTTATGAAGATGAAAAAATAA

Protein sequence : 
MAKIATREAYGQALAEFGEIYKNIVVLDADLSKSTRTEIFKKKFPERFFNIGIAEQDLMATAAGFATCGKIPFASTFAVF
AAGRAYDQVRNSIGYPHLNVKIGASHAGVSIGEDGASHQMLEDIALMRVIPGMVVLSPADATSTYECVRLAIEHEGPVYI
RLGRLGVEEIYKKGELKLTLGKGIVLQKGKDVGILATGLMVHEAIKAAKMLQDEGVSVYLVDMPCIKPIDVDLILDVAKI
TGCIVTAEEHNILGGFGSAVSEVLAQNYPVPVKMVGVNDEFGRSGKPEDVLKYYKLTAEEIVNKAKEVMKMKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96118.1 transketolase Not tested T-PAI Protein 1e-36 43
unnamed AAT96230.1 transketolase Not tested T-PAI Protein 5e-30 42