Gene Information

Name : COB47_0870 (COB47_0870)
Accession : YP_003840165.1
Strain : Caldicellulosiruptor obsidiansis OB47
Genome accession: NC_014392
Putative virulence/resistance : Unknown
Product : cysteine desulfurase NifS
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1104
EC number : -
Position : 989656 - 990840 bp
Length : 1185 bp
Strand : +
Note : KEGG: ate:Athe_1714 cysteine desulfurase NifS; TIGRFAM: cysteine desulfurase NifS; PFAM: aminotransferase class V

DNA sequence :
ATGGAAGGGAAAATTATTTATTTTGACCATGCAGCGACAACCCCTCTTAAAAAGGAAGTATTAGATGAGATGATGCCGTA
TTTGACAGAGCAGTATGGCAATCCTTCAACAATTTACAAGCTTGGAAGAGAAGCAAAAAAAGCAGTTGAGCTTGCAAGAG
AAAGGGTCGCAAAGGCCTTAAATGCAGATATTCAAGAAATTTACTTTACCTCCGGTGGAACAGAATCAGATAACTGGGCA
TTAAAAGGAGTTGCTTTTGCAAATAAAGATAAAGGCAAGCATATTATAACAACAACCATCGAACACCATGCAGTTTTACA
TCCTCTAAAATATCTTGAAGGTTTAGGATTTGAAGTGACATATGTTCCTGTTGAGCCAAATGGTATTGTTGACCCTCAGA
AGATAAAAGAGGCAATAAGAAATGACACTATTTTGATTTCTGTCATGCTTGCAAATAACGAAATTGGGACAATCCAGCCT
GTCAAAGAGATAGCAAAGATAGCAAAGGAAAAAGGAATAATCATTCATACAGATGCTGTTCAAGCAGTTGGGCAAATTCC
TGTTGATGTAAAAGATTTGGGTGTCGACCTTTTATCACTTTCTGCTCATAAATTCTATGGTCCAAAAGGTGTTGGTGCAC
TTTATATCAGAAAAGGGACAAAGATTCATCCATTTTCGCATGGTGGTGCACAGGAGAGAAATAGGCGTGCTGGGACAGAG
AATGTAGCAGGGATTGTTGGACTTGGAAAGGCTATAGAGCTTGCAACTCAGAACCTTTCTGAGTATGCTGCAAAGCTTCA
GAAACTGAGAGATAAGCTCATTGACGGAGTGCTGAGCAAAATTGATTATGTTCGACTCAATGGTGACAGAAATCAGAGAC
TTCCTAACAATGCTAATTTCTCATTTGAGTTTATTGAAGGTGAAAGCCTGCTTTTGATGCTTGACATGAAAGGAATTGCA
GCATCAAGCGGGTCTGCATGCACATCAGGGTCTTTGGACCCTTCACATGTGCTTCTGGCAATTGGACTTGAACATGAGGT
TGCTCATGGATCTTTGAGAATAACACTTGGTGAAGATAACACCGAAGAAGACATAGACTATCTATTAGAAGTTTTGCCTG
AAATTGTTTCAAGATTAAGAGAAATGAGTCCACTTTATGAAAGCGTGAAAAAAGGGGGCAATTGA

Protein sequence :
MEGKIIYFDHAATTPLKKEVLDEMMPYLTEQYGNPSTIYKLGREAKKAVELARERVAKALNADIQEIYFTSGGTESDNWA
LKGVAFANKDKGKHIITTTIEHHAVLHPLKYLEGLGFEVTYVPVEPNGIVDPQKIKEAIRNDTILISVMLANNEIGTIQP
VKEIAKIAKEKGIIIHTDAVQAVGQIPVDVKDLGVDLLSLSAHKFYGPKGVGALYIRKGTKIHPFSHGGAQERNRRAGTE
NVAGIVGLGKAIELATQNLSEYAAKLQKLRDKLIDGVLSKIDYVRLNGDRNQRLPNNANFSFEFIEGESLLLMLDMKGIA
ASSGSACTSGSLDPSHVLLAIGLEHEVAHGSLRITLGEDNTEEDIDYLLEVLPEIVSRLREMSPLYESVKKGGN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96060.1 cysteine desulfurase Not tested T-PAI Protein 4e-59 45