Gene Information

Name : Clocel_2848 (Clocel_2848)
Accession : YP_003844308.1
Strain : Clostridium cellulovorans 743B
Genome accession: NC_014393
Putative virulence/resistance : Virulence
Product : type I secretion system ATPase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG2274
EC number : -
Position : 3497556 - 3499700 bp
Length : 2145 bp
Strand : -
Note : TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter transmembrane region; peptidase C39 bacteriocin processing; ABC transporter related; KEGG: hch:HCH_06117 bacteriocin/lantibiotic ABC transporter; SMART: AAA ATPase

DNA sequence :
ATGACAATTGATCCGAACGCAATAGTAGAAAATAACGATACAGGCATGGAGTGTATTATGTATGTTTTTGCTATTCAAGG
AATTCAAGTAGAAAAAAATGAATTGAGGCAAAGATACTTAAAACCAGAAGAGTCTTTTAATGATAATAAGCTAATTAGAG
TTTTAAGAGATAATGGGATTAAAGCAAAACATAAAAAATACTCCATAGAAAAATTAAAAAAGGCAACTATGCCCATAGTT
ATAAAATTGGATGGGGACTATTATTTACTTTTAAGAATAATTGAAGATAAAGCAGTATTTATAAATACAAAAATTAACAA
AACGGAAAAAGTAAATGTCGAAGAGATAACTAGTAGATGGAATGGTGAGGTTATAGCTTTTAAAAAGAGTAGTGATGAAT
TGAAAGAAGGAGTATTTAATATAAAATGGTTTATACCGACTATTAAAAAGTTTAAAAAACCGCTAATAGTTACCCTTTTA
GCATCACTGATGATTCAAATTTTATCTATAGTAATGCCTATGATTATGCAGGTAATTATTGATAAAGTTTTAGTTCACAG
AACCAATTCTACTTTAAATATATTATGTGGAATACTTGTTTTTGTAATAGTTTGTGATTTAGTGCTGAATTTAGCACGTA
CATACGTTTTTACTCATACAACTAGTAAAATTGATATAGTTTTGGGCGCTAGGTTGGTAAATCACTTATATAAGCTTCCG
TTAAAATACTTCGAATCAAGAAGAGTAGGAGATACAATAGCCAGAGTTAGGGAAATTGATAATATAAGACACTTCTTAAC
AGGAGCTCCTCTTACATCTGTATTAGATATAGCTTTTATTTTTGTATATTTCATAATTATGTTTGTTTATAGTAAGACTT
TAAGTATCATTGTTTTACTATCATTACCAGTGTTTGTGATTTTTTCTTTAGTTTTAACACCTATATTAAGAAGTAGAATT
GATGAAAGATTTTATGCTGGCGCAGAAGCTCAATCTTTTTTAGTAGAATCAGTTAACGGATCGCAAACACTTAAAGCTTT
TGCTTTAGAGAATGAATTCCAAAAACGTTGGGAAGGCTATCTTACAAAACAAGCAAAGACAAGCTTTAAAACGACAATAC
TTGGCAGTTATGCATCAAATTTTGCTGGATTTATTCAAAAATTATTGGATTTAATAATTTTATGGGTCGGCGCAAGCTTG
GCCATGAACAATAAAATGACAATCGGAGAACTGGTTGCTTTTAGAATGTTATCTTCTAGAGTAAGTCAGCCGATTTTAAG
ACTTGTTCAAATGTGGAATGATTTTCAACAAACAGGAATTTCCCTTAATAGAATAGGTGATATATTTAATACTCCATCAG
AGGATTTTAATCAATCCAAAAAATTAAGAATAAATAATTTCCAAGGAAATGTACGTTTTGAAGATGTTGTGTTTAGATAT
ACTATGGAATCAGCACCTGCAATAAAAAATGCTTCATTTCAAATAAATAAAGGTGAAATAATCGGAATTGTTGGTCGAAG
TGGATCCGGCAAAAGTACAATTTCAAAGCTTATTCAAAGGTTGTATATAGCTGAAGAAGGGAGAATATTGATAGATGGTA
TTGATATCAATATGATAGATCAATTTTGGCTTAGAAAGCAAATAGGAGTAGTATTGCAAGAAAATTTCTTGTTTAGAGGC
ACTGTTAGGGATAATATTGCAATAGACAAGCCTAATGCTACTTTAGAACAGATAGTTCATGTTGCAAAGATCGCTGGAGC
ACATGAGTTTATATCGAAATTATCTGAAGGGTATGATACAGAAATAGGTGAAAATGGTATAGGTTTATCTGGTGGACAGA
AACAACGATTGGCCATTGCTAGAGCATTAATTACTAACCCAAGAATTCTTATTTTTGATGAAGCTACTTCAGCACTTGAT
TATGAATCAGAAGCGATAATACAGAATAATTTAAAGGCTATATGTCATGGAAGGACAGTGATAATTATAGCCCACAGGTT
ATCAACCCTAAGTGAAGCAACAAGAATTATTTCTATTGATAAAGGGGTAATAATAGAAACTGGTACCCATGAACAACTAA
TGCAAAATAAGAAAATATACTATAATTTATACATGCAACAAAAAGGGGGAAAAGTAAGTGATTAA

Protein sequence :
MTIDPNAIVENNDTGMECIMYVFAIQGIQVEKNELRQRYLKPEESFNDNKLIRVLRDNGIKAKHKKYSIEKLKKATMPIV
IKLDGDYYLLLRIIEDKAVFINTKINKTEKVNVEEITSRWNGEVIAFKKSSDELKEGVFNIKWFIPTIKKFKKPLIVTLL
ASLMIQILSIVMPMIMQVIIDKVLVHRTNSTLNILCGILVFVIVCDLVLNLARTYVFTHTTSKIDIVLGARLVNHLYKLP
LKYFESRRVGDTIARVREIDNIRHFLTGAPLTSVLDIAFIFVYFIIMFVYSKTLSIIVLLSLPVFVIFSLVLTPILRSRI
DERFYAGAEAQSFLVESVNGSQTLKAFALENEFQKRWEGYLTKQAKTSFKTTILGSYASNFAGFIQKLLDLIILWVGASL
AMNNKMTIGELVAFRMLSSRVSQPILRLVQMWNDFQQTGISLNRIGDIFNTPSEDFNQSKKLRINNFQGNVRFEDVVFRY
TMESAPAIKNASFQINKGEIIGIVGRSGSGKSTISKLIQRLYIAEEGRILIDGIDINMIDQFWLRKQIGVVLQENFLFRG
TVRDNIAIDKPNATLEQIVHVAKIAGAHEFISKLSEGYDTEIGENGIGLSGGQKQRLAIARALITNPRILIFDEATSALD
YESEAIIQNNLKAICHGRTVIIIAHRLSTLSEATRIISIDKGVIIETGTHEQLMQNKKIYYNLYMQQKGGKVSD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hlyB NP_755448.1 hemolysin B Virulence PAI I CFT073 Protein 6e-145 44
hlyB CAD33760.1 hemolysin B Virulence PAI I 536 Protein 5e-145 44
hlyB CAD42038.1 HlyB protein Virulence PAI II 536 Protein 5e-145 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Clocel_2848 YP_003844308.1 type I secretion system ATPase VFG0841 Protein 2e-142 46
Clocel_2848 YP_003844308.1 type I secretion system ATPase VFG1269 Protein 8e-150 44
Clocel_2848 YP_003844308.1 type I secretion system ATPase VFG1557 Protein 3e-145 44
Clocel_2848 YP_003844308.1 type I secretion system ATPase VFG1501 Protein 3e-145 44
Clocel_2848 YP_003844308.1 type I secretion system ATPase VFG0907 Protein 2e-145 44