Gene Information

Name : Galf_1768 (Galf_1768)
Accession : YP_003847543.1
Strain : Gallionella capsiferriformans ES-2
Genome accession: NC_014394
Putative virulence/resistance : Unknown
Product : cytochrome c-type biogenesis protein CcmF
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG1138
EC number : -
Position : 1928908 - 1930917 bp
Length : 2010 bp
Strand : -
Note : KEGG: slt:Slit_1793 cytochrome c-type biogenesis protein CcmF; TIGRFAM: cytochrome c-type biogenesis protein CcmF; PFAM: cytochrome c assembly protein

DNA sequence :
ATGATTCCAGAACTAGGTCATTTTTCTCTCATTGTCGCGCTGTGTCTGGCGATCGTCTTAGGTGTGCTGCCCATAGTGGG
CGCTGCGCGCAACAATCCTGTCTTGATGGGGGTTGCGCGACCTTTGGCTTACGGGCAGTTGCTTTTTATCGGACTTGCGT
TTGCCACGCTAGCCTATGCCTTTTTGGGCAACGATTTCTCTGTCTTGTATGTCGCGCAACATTCGAACTCTCAATTGCCC
GGGCAATATCGTTTTGCGGCGATCTGGGGCGGGCATGAGGGCTCGCTCTTGCTGTGGGCCTTGCTGCTATCGGTTTGGAC
CGCTGCGGTTGCGATGTTTAGCCGTCATTTGCCTGAAGAGATGGTCGCACGTGTGTTGGGCGTGATGGGATTGATTTCGG
TCGGATTCCTGATGTTCATGTTGTTCACCAGCAGTCCGTTCGATCGCCTGTTGCCGGCGGCTGCCGATGGTCGCGATCTG
AACCCTCTGTTGCAAGATCCGGGGCTGGTAATTCATCCGCCGATGCTCTATATGGGCTATGTCGGGTTCTCCGTGGCGTA
TGCTTTTGCGATCTCAGCCTTGCTAGGTGGAAAGCTTGATGCAACCTGGGCGCGCTGGTCGCGTCCTTGGACGACGGTGG
CGTGGGTGTTTATGACCATCGGCATTGCGCTGGGCAGCGGCTGGGCCTATTACGAATTGGGCTGGGGCGGCTGGTGGTTC
TGGGATCCGGTCGAGAACGCCTCGTTCATGCCATGGTTGCTAGGCACGGCCCTGATTCATTCGCTGGCCGTAACTGAAAA
GCGCGGCGCATTCAAAAGCTGGACGGTGTTGCTGGCGATCGCGGCGTTTTCGTTTAGCCTGTTGGGTACCTTCCTCGTGC
GCTCCGGTGTGTTGACCTCGGTACACTCGTTCGCCGCCGACCCTAAGCGTGGTATCTTTATTTTGAGTTTTCTAGTGCTG
GTGATCGGTGCTTCCTTGCTGTTGTTCGCCTGGCGTGCACCTAAGGTCGGTTTGGGCGGCAAGTTCGATATGCTGTCGCG
CGAGTCCTTGCTGCTGTCAAATAACGTGTTGCTGTCGGTTGCCTCGGCTTCCGTCTTTATCGGTACGTTGTATCCTCTGT
TCATGGATGCCTTAGGTTACGGAAAACTCTCGGTCGGTCCGCCGTACTTCGAAGCCGTTTTCGTGCCGCTGATGATGCCG
ATGGTGTTCATGATGGGCTTAGGGCCACTGGCGCGCTGGAAAAAAATGGCCGTGCCTGATCTAGCGCAGCGTGTGAAATG
GGCGTTTGCCAGTTCGCTGGTATTGGCCTTGCTGCTGCCACTCTTGATGGGTCGTTTTTTGTCGCTGGAATCGAACAAAT
GGTCGCCGATGATCGTGTTGGGGCTGTTGATGGCGTTCTGGATTATCGCGACCCTGTTCGTCGGCTTGCGCCAGCGCTTA
TCAGGGCAGGGCGCATTCATGGCGCGGGTGCGCAAGCAAAGCATGAGCTATTACGGTATGCAACTGGCGCATTTGGGTGT
GGCGTTGTTTATCATCGGCGTAACGCTGGTGAAGGGGTATGAAACCGAACGCGATGTGCGCATGAATGTCGGCGACACCG
TGATGGCGGGTGGCTATGAGTTCCGTTTCAACGGCGTGACTGAGACTGAGGGGCCTAATTATGTTGCCGGTGTCGGCCAT
GTCACGGTCAGTCATGACGGCAAAATTGTCGGTGAATTGACCCCTGAAAAACGTCAGTACAATGTCTCCGGTATGCCGCT
GACGGAAGCTGCGATTCAGACCGGCGTGTTCCGCGATCTGTATGTGTCGCTGGGCGAGCCTATTCCGGAATCGGAAGGTG
CGTGGGCGGTGCGCGTTTATATCAAACCATTTATCGACTGGATATGGGCTGGCACGCTGTTGATGGCGCTGGGCGGTATG
CTGGCCGTGTCTGATCGTCGTTATCGCATCCACAAGAAGGCGGGGAAAATTGCACGGTCTTCCGCAATTGATCAAGGAGT
CGCATCATGA

Protein sequence :
MIPELGHFSLIVALCLAIVLGVLPIVGAARNNPVLMGVARPLAYGQLLFIGLAFATLAYAFLGNDFSVLYVAQHSNSQLP
GQYRFAAIWGGHEGSLLLWALLLSVWTAAVAMFSRHLPEEMVARVLGVMGLISVGFLMFMLFTSSPFDRLLPAAADGRDL
NPLLQDPGLVIHPPMLYMGYVGFSVAYAFAISALLGGKLDATWARWSRPWTTVAWVFMTIGIALGSGWAYYELGWGGWWF
WDPVENASFMPWLLGTALIHSLAVTEKRGAFKSWTVLLAIAAFSFSLLGTFLVRSGVLTSVHSFAADPKRGIFILSFLVL
VIGASLLLFAWRAPKVGLGGKFDMLSRESLLLSNNVLLSVASASVFIGTLYPLFMDALGYGKLSVGPPYFEAVFVPLMMP
MVFMMGLGPLARWKKMAVPDLAQRVKWAFASSLVLALLLPLLMGRFLSLESNKWSPMIVLGLLMAFWIIATLFVGLRQRL
SGQGAFMARVRKQSMSYYGMQLAHLGVALFIIGVTLVKGYETERDVRMNVGDTVMAGGYEFRFNGVTETEGPNYVAGVGH
VTVSHDGKIVGELTPEKRQYNVSGMPLTEAAIQTGVFRDLYVSLGEPIPESEGAWAVRVYIKPFIDWIWAGTLLMALGGM
LAVSDRRYRIHKKAGKIARSSAIDQGVAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ccmF AAN62106.1 putative cytochrome C-type biogenesis protein CcmF Not tested PAGI-2(C) Protein 1e-150 59
ccmF YP_217241.1 cytochrome c-type biogenesis protein Not tested SPI-12 Protein 2e-119 55