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Name : Galf_0551 (Galf_0551) Accession : YP_003846358.1 Strain : Gallionella capsiferriformans ES-2 Genome accession: NC_014394 Putative virulence/resistance : Unknown Product : DNA-directed RNA polymerase subunit beta Function : - COG functional category : K : Transcription COG ID : COG0085 EC number : - Position : 596164 - 600243 bp Length : 4080 bp Strand : + Note : KEGG: slt:Slit_0760 DNA-directed RNA polymerase, beta subunit; TIGRFAM: DNA-directed RNA polymerase, beta subunit; PFAM: RNA polymerase Rpb2 domain 6; RNA polymerase Rpb2 domain 2; RNA polymerase Rpb2 domain 3; RNA polymerase Rpb2 domain 7; RNA polymerase DNA sequence : ATGAGCTACTCTTTTACCGAAAAAAAACGTATTCGTAAAAGTTTCGGCAAGCGAATCGGTGCACTTCCGGTTCCTTTCCT TTTATCCACCCAATTGGAAGCCTTTGCTGCCTTTCTTCAGGAGGCAACTGCGCCTGAAAAACGCAAAAATGAAGGTTTGC AAGCTGCTTTCAACGGAATATTTCCGATTGAAAGCCATTCTAAGAATGCCAGACTGGATTTCGTCAGCTATATGCTGGGG ACACCGGCTTTTGACGTCAAGGAATGTCAGCAGCGCGGCTTGACCTACGCATCGCCACTGCGCGCTCGCGTACGCCTGAC CATTATGGATAAGGAAGCTTCCAAACCGACGGTAAAGGAAGTAAAAGAGCAGGAAGTTTACATGGGCGAAATGCCTCTGA TGACGAATACTGGTTCTTTCGTGATCAACGGTACAGAGCGCGTTATCGTGTCTCAGCTGCATCGTTCTCCAGGCGTGTTC TTCGAGCATGACCGGGGCAAAACACACTCTTCGGGCAAATTGCTGTTCTCCGCACGTATTATTCCTTACCGTGGTTCATG GTTGGATTTTGAATTCGATGCCAAGGATTACGTCTATTTCCGTATCGATCGTCGCCGCAAAATGCCAGTTACGATCCTGC TGCGCTCATTGGGTTACACCAATGAAGACATGCTGGGCATGTTCTACGAATTCGACACCTTCCAACTGGGCAAAAAGGGC GGTATTCAGTTTGAAGTGGTTGCAGAACGTCTGCGCGGCGAAATCGCGCGCTTCGATATTCTGGACAAGTCGGGCAAGAC CATCGTCGCCACCGACAAGCGCATCACTGTGCGCCACATCCGTCAGATGCAGGAAGCGGGGATCGACAAATTGGCTGTTG CCGACGATTTCCTGCTGGGCCGTGTTATCGCGAATAACGTCATCGACAAAGAAAGCGGCGAAATTATTGCCAATGCCAAC GATGTGATGACCGAAGAGCTGCTGCGCAAGTTGCAGGATGCGAATGTCACCAAGCTTAACACCCTGTACACCAACGATTT GGATCAGGGCGCGTACATATCGCAAACCCTGCGCACGGATGAAACCACTGATAAGTGGACCGCACGCGTTGCGATTTATC GCATGATGCGTCCCGGCGAGCCGCCGACCGAAGAGTCGGTAGAAGGCTTGTTCAATGGTCTGTTCTTCAGCGAAGAGCGT TACGATCTGTCAGTCGTCGGCCGTATGAAGTTCAATCGCCGCGTAGGTCGCGAAGAGTTGACCGGTTCACCGATTTTGTC CAATGAGGACATCGTTGCGGTGGTTAAGATTCTGGTTGAATTGCGCAATGGTCGCGGCGAAATCGACGATATCGATCACT TGGGTAATCGTCGCGTACGTGCGGTGGGTGAGTTGGCTGAGAACCAGTTCCGCGTGGGTCTGGCTCGTGTAGAGCGCGCT GTTAAAGAGCGCTTAGGTCAGGCGGAAGCAGATAATCTGATGCCGCATGATCTGATCAATGCTAAGCCGATTTCAGCCGC GATCAAGGAATTCTTTGGTTCGAGCCAACTGTCGCAGTTTATGGATCAAACCAATCCGCTGTCTGAAGTAACGCACAAGC GTCGTATTTCAGCATTGGGACCGGGTGGTCTGACGCGTGAACGTGCTGGCTTTGAAGTTCGCGACGTGCATCCGACGCAC TATGGTCGTGTATGTCCAATCGAAACGCCGGAAGGTCCAAACATTGGTCTTATTAACTCTTTAGCACTGTACGCACGCAC CAACGAGTACGGCTTTATTGAAACACCGTATCGTAAAGTGACGAATGGTTGTGTATCTAACGATGTTGACTATCTGTCAG CCATTGAAGAGAGCACCTACACCATTGCGCAGGCGAATGCGGAATTGGATAAGAAGGGCCGCTTTACGGATGACATCGTT TCCGCACGCCGCCACAACGAATTTGTGCTGGCAGCGCCCGATACCATCAATTACATGGACGTATCACCATCGCAAGTCGT ATCGGTAGCCGCCTGTCTGATTCCGTTCCTGGAACACGACGATGCGAACCGCGCGTTGATGGGTGCCAATATGTCACGTC AGGCTGTGCCTTGCTTGCGTGCTGAAAAGCCGCTGGTGGGTACGGGTATCGAACGCACGGTTGCACTCGATTCGGGTACG GCAGTGCAAGCAATTCGTGGCGGTCGTATCGATTACGTGGATGCAGCGCGTATCGTGGTGCGGGTGAATGATGAAGAAAC GACGGCGGGTGAAGTCGGTGTTGATATTTACAACCTGATCAAGTACACCCGTTCGAATCAGAACACCAATATCAATCAGC GTCCGCTGGTCAAGGTAGGTGATGTGATTGCTCGCGGCGACGTCGTGGCTGACGGTGCTTCAACTGATATGGGTGAGCTG GCGCTGGGTCAAAACGTGCTGGTCGCGTTTATGCCTTGGAACGGTTACAACTACGAAGATTCGATTCTGATTTCAGAACG AATCATCGCTCAGGATCGTTTTACTTCGATCCATATCGAAGAGCTGACTGTGGTTGCACGCGATACCAAGCTGGGTACCG AGGAAATCACTCGCGATATTCCTAATCTGTCTGAAGTGCAATTGGGCCGTCTGGATGACTGCGGTATCGTGCATATCGGT GCGGAAGTGGCGGTAGGCGACGTACTGGTCGGTAAAGTCACCCCTAAGGGCGAAACTCAACTGACACCGGAAGAAAAGTT GCTGCGCGCAATTTTCGGCGAAAAGGCCTCCGATGTGAAGGATACCAGTCTGCGTGTTTCTGCAGGTAGTTCCGGTACGG TCATCGACGTTCAAGTGTTTACCCGCGAAGGTCTGCAGCGCGACAAGCGTGCCCAGCAGATCGTCGATGATGAACTGAAC CGTTACAAGAAGGATCTGGCCGATCAGATGCGTATCGTTGAGAGCGATGCTTTCACACGTCTCGAAAAGTTGCTGCTGGA TAAGGTTGCCAATGGCGGTCCTAAGAAGCTGGCTAAGGGTAGCTTACTGACGGCTGACTACTTGTCGGGTGTCGAGCATC ATCAATGGTTTGATATTCGCCTGGCAGACGATGAAGTCGCCGCGCAAATGGAACAGGTCAAGGATGGTCTGGCGCAAAAG CGTCTGGAATTCGATGCGGCTTTCGAATTGAAGAAGAAAAAGATGACGCAGGGCGATGAGTTGCAAGCCGGCGTGCAGAA GATGGTTAAGGTCTACGTTGCAGTTAAGCGTCGTCTGCAACCGGGTGATAAGATGGCCGGTCGTCACGGTAACAAGGGTG TGATCTCACGCATTGTTCCTGTTGAAGATATGCCTTATATGGCTGACGGTACGCCGGTTGACGTGGTGTTGAACCCGTTG GGCGTTCCTTCACGGATGAACATCGGTCAGATTCTGGAAACCCATCTGGGCTGGGCTGCCAATGGCTTAGGTAAGAAGAT TGATCAGATGTTGCAGACCAATGCCAAGATCACCGAATTGCGCGGCTTCCTCGACAAGATCTACAACAATAACAACGGTC AGTCTGTTGATTTCAAATCGTTTACCGACGACGAAATCATCGAATTGTGCCGCAATCTGCGTAAGGGTGTGCCTTTTGCG ACCCCGGTATTTGACGGTGCATCGGAAGAAGAAATCAAGTACATGCTGGCGCTGGCTGACTTGCCGCTGTCGGGCCAAAC GACCTTGCATGACGGTCGTACCGGCGAAGCGTTTGATCGTCCAGTCACGGTAGGTTACAAGCATGTGCTGAAGCTGCATC ACTTGGTTGATGACAAGATGCATGCACGTTCAACCGGTCCATACAGCCTGGTTACACAACAGCCGCTGGGTGGTAAGGCA CAGTTCGGTGGTCAGCGTTTCGGTGAAATGGAAGTCTGGGCGTTGGAAGCGTATGGCGCGGCTTACACCTTGCAGGAAAT GCTCACCGTTAAGTCGGATGACGTAGCCGGACGTACCAAGGTGTATGAAAATATCGTCAAGGGTGATCACAAGATCGACG CCGGCATGCCGGAGTCGTTCAATGTGGTGATCAAGGAAATCAGATCTCTCGCCATCGATATGGATTTGGAGCGTAACTAG Protein sequence : MSYSFTEKKRIRKSFGKRIGALPVPFLLSTQLEAFAAFLQEATAPEKRKNEGLQAAFNGIFPIESHSKNARLDFVSYMLG TPAFDVKECQQRGLTYASPLRARVRLTIMDKEASKPTVKEVKEQEVYMGEMPLMTNTGSFVINGTERVIVSQLHRSPGVF FEHDRGKTHSSGKLLFSARIIPYRGSWLDFEFDAKDYVYFRIDRRRKMPVTILLRSLGYTNEDMLGMFYEFDTFQLGKKG GIQFEVVAERLRGEIARFDILDKSGKTIVATDKRITVRHIRQMQEAGIDKLAVADDFLLGRVIANNVIDKESGEIIANAN DVMTEELLRKLQDANVTKLNTLYTNDLDQGAYISQTLRTDETTDKWTARVAIYRMMRPGEPPTEESVEGLFNGLFFSEER YDLSVVGRMKFNRRVGREELTGSPILSNEDIVAVVKILVELRNGRGEIDDIDHLGNRRVRAVGELAENQFRVGLARVERA VKERLGQAEADNLMPHDLINAKPISAAIKEFFGSSQLSQFMDQTNPLSEVTHKRRISALGPGGLTRERAGFEVRDVHPTH YGRVCPIETPEGPNIGLINSLALYARTNEYGFIETPYRKVTNGCVSNDVDYLSAIEESTYTIAQANAELDKKGRFTDDIV SARRHNEFVLAAPDTINYMDVSPSQVVSVAACLIPFLEHDDANRALMGANMSRQAVPCLRAEKPLVGTGIERTVALDSGT AVQAIRGGRIDYVDAARIVVRVNDEETTAGEVGVDIYNLIKYTRSNQNTNINQRPLVKVGDVIARGDVVADGASTDMGEL ALGQNVLVAFMPWNGYNYEDSILISERIIAQDRFTSIHIEELTVVARDTKLGTEEITRDIPNLSEVQLGRLDDCGIVHIG AEVAVGDVLVGKVTPKGETQLTPEEKLLRAIFGEKASDVKDTSLRVSAGSSGTVIDVQVFTREGLQRDKRAQQIVDDELN RYKKDLADQMRIVESDAFTRLEKLLLDKVANGGPKKLAKGSLLTADYLSGVEHHQWFDIRLADDEVAAQMEQVKDGLAQK RLEFDAAFELKKKKMTQGDELQAGVQKMVKVYVAVKRRLQPGDKMAGRHGNKGVISRIVPVEDMPYMADGTPVDVVLNPL GVPSRMNIGQILETHLGWAANGLGKKIDQMLQTNAKITELRGFLDKIYNNNNGQSVDFKSFTDDEIIELCRNLRKGVPFA TPVFDGASEEEIKYMLALADLPLSGQTTLHDGRTGEAFDRPVTVGYKHVLKLHHLVDDKMHARSTGPYSLVTQQPLGGKA QFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVAGRTKVYENIVKGDHKIDAGMPESFNVVIKEIRSLAIDMDLERN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00346 | YP_008207811.1 | DNA-directed RNA polymerase, beta subunit/140 kD subunit | Not tested | AbaR25 | Protein | 0.0 | 66 |
| BJAB0868_00350 | YP_008211676.1 | DNA-directed RNA polymerase, beta subunit/140 kD subunit | Not tested | AbaR26 | Protein | 0.0 | 66 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Galf_0551 | YP_003846358.1 | DNA-directed RNA polymerase subunit beta | NC_008702.1.4609796. | Protein | 0.0 | 77 |
| Galf_0551 | YP_003846358.1 | DNA-directed RNA polymerase subunit beta | CP002695.1.gene18.p0 | Protein | 0.0 | 75 |
| Galf_0551 | YP_003846358.1 | DNA-directed RNA polymerase subunit beta | NC_011035.1.6448762. | Protein | 0.0 | 72 |
| Galf_0551 | YP_003846358.1 | DNA-directed RNA polymerase subunit beta | CP000675.2.gene392.p | Protein | 0.0 | 69 |
| Galf_0551 | YP_003846358.1 | DNA-directed RNA polymerase subunit beta | NC_002516.2.881699.p | Protein | 0.0 | 68 |
| Galf_0551 | YP_003846358.1 | DNA-directed RNA polymerase subunit beta | NC_009085.4918494.p0 | Protein | 0.0 | 67 |
| Galf_0551 | YP_003846358.1 | DNA-directed RNA polymerase subunit beta | NC_010400.5987325.p0 | Protein | 0.0 | 66 |
| Galf_0551 | YP_003846358.1 | DNA-directed RNA polymerase subunit beta | NC_010611.6233925.p0 | Protein | 0.0 | 66 |
| Galf_0551 | YP_003846358.1 | DNA-directed RNA polymerase subunit beta | NC_011595.7060572.p0 | Protein | 0.0 | 66 |
| Galf_0551 | YP_003846358.1 | DNA-directed RNA polymerase subunit beta | NC_010410.6003841.p0 | Protein | 0.0 | 66 |
| Galf_0551 | YP_003846358.1 | DNA-directed RNA polymerase subunit beta | NC_011586.7046027.p0 | Protein | 0.0 | 66 |
| Galf_0551 | YP_003846358.1 | DNA-directed RNA polymerase subunit beta | NC_002695.1.914942.p | Protein | 0.0 | 65 |
| Galf_0551 | YP_003846358.1 | DNA-directed RNA polymerase subunit beta | CP004022.1.gene2794. | Protein | 0.0 | 65 |
| Galf_0551 | YP_003846358.1 | DNA-directed RNA polymerase subunit beta | CP001138.1.gene4362. | Protein | 0.0 | 65 |
| Galf_0551 | YP_003846358.1 | DNA-directed RNA polymerase subunit beta | CP001918.1.gene250.p | Protein | 0.0 | 65 |
| Galf_0551 | YP_003846358.1 | DNA-directed RNA polymerase subunit beta | CP000034.1.gene3741. | Protein | 0.0 | 65 |
| Galf_0551 | YP_003846358.1 | DNA-directed RNA polymerase subunit beta | CP000647.1.gene4402. | Protein | 0.0 | 65 |
| Galf_0551 | YP_003846358.1 | DNA-directed RNA polymerase subunit beta | AM180355.1.gene120.p | Protein | 0.0 | 47 |
| Galf_0551 | YP_003846358.1 | DNA-directed RNA polymerase subunit beta | NC_012469.1.7686402. | Protein | 0.0 | 44 |
