Gene Information

Name : Tthe_1439 (Tthe_1439)
Accession : YP_003852037.1
Strain : Thermoanaerobacterium thermosaccharolyticum DSM 571
Genome accession: NC_014410
Putative virulence/resistance : Virulence
Product : flagellar biosynthetic protein FliQ
Function : -
COG functional category : N : Cell motility
COG ID : COG1987
EC number : -
Position : 1445518 - 1445787 bp
Length : 270 bp
Strand : -
Note : KEGG: tex:Teth514_1676 flagellar biosynthesis protein FliQ; TIGRFAM: flagellar biosynthetic protein FliQ; PFAM: export protein FliQ family 3

DNA sequence :
ATGGATCCTGGAGTAGTTCTTGATATTGGAAGGGAAGCATTAATGGTAACAATGATTGTATCAGCGCCGCTTTTAATTGT
ATCTCTATTGATAGGACTCATTATAAGTATATTTCAAGCGACAACACAGATTCAGGAGCAGACTTTGACATTTGTACCGA
AGATTTTAGCTATTTTTGCTTCTATAATATTGTTTGGGCCATGGATGCTAACAATATTAATTAATTATACACAAAAATTA
ATATTGAACATTAATAATTTTATTAAGTAG

Protein sequence :
MDPGVVLDIGREALMVTMIVSAPLLIVSLLIGLIISIFQATTQIQEQTLTFVPKILAIFASIILFGPWMLTILINYTQKL
ILNINNFIK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
escS AFO66401.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 2e-04 42
escS AFO66341.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 2e-04 42
escS AAC31527.1 L0048 Virulence LEE Protein 0.001 42
escS ACU09472.1 hypothetical protein Not tested LEE Protein 0.001 42
unnamed AAL06355.1 EscS Virulence LEE Protein 6e-04 42
escS YP_003236102.1 T3SS structure protein EscS Virulence LEE Protein 0.002 42
escS NP_290282.1 hypothetical protein Virulence LEE Protein 0.002 42
ECs4582 NP_312609.1 EscS Virulence LEE Protein 0.002 42
escS AAC38370.1 EscS Virulence LEE Protein 0.001 42
escS CAI43888.1 EscS protein Virulence LEE Protein 6e-04 41
escS AAK26701.1 EscS Virulence LEE Protein 6e-04 41
escS AAL57528.1 EscS Virulence LEE Protein 6e-04 41
escS YP_003223489.1 T3SS structure protein EscS Virulence LEE Protein 8e-04 41
escS CAC81848.1 EscS protein Virulence LEE II Protein 6e-04 41
escS YP_003232139.1 T3SS structure protein EscS Virulence LEE Protein 8e-04 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tthe_1439 YP_003852037.1 flagellar biosynthetic protein FliQ VFG1260 Protein 4e-11 49
Tthe_1439 YP_003852037.1 flagellar biosynthetic protein FliQ VFG2339 Protein 2e-10 45
Tthe_1439 YP_003852037.1 flagellar biosynthetic protein FliQ VFG2495 Protein 2e-09 42
Tthe_1439 YP_003852037.1 flagellar biosynthetic protein FliQ VFG0826 Protein 6e-04 42
Tthe_1439 YP_003852037.1 flagellar biosynthetic protein FliQ VFG0716 Protein 6e-04 42