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Name : PB2503_05237 (PB2503_05237) Accession : YP_003854264.1 Strain : Parvularcula bermudensis HTCC2503 Genome accession: NC_014414 Putative virulence/resistance : Unknown Product : Cytochrome c-type biogenesis protein CcmF Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1138 EC number : - Position : 984790 - 986802 bp Length : 2013 bp Strand : + Note : - DNA sequence : ATGACGTCAGACATTGGACAAGTAAGCCTTATTCTCGCGCTGCTCACAGCTCTTGTGCAAACAGGGCTTGGGCTTTGGGG GGGGCATCGTGGCGATACCGCGTTGATGAGCGGCGCAAGTCGCGCAGCGCTTTGCCAAGCGGGGTTGGTCGTCCTTGCCT TTGCGGCGTTGACCGTGGCGTTTATCCGGTCCGATTTCGCAATTCTGACGGTGTTTCAGAATTCTCATACGGCCAAGCCG CTGATCTATAAAATCGCCGGAGTCTGGGGCAATCACGAAGGATCACTGCTTCTTTGGGTCATGATTCTGGCGGGTCTTGG CGCGGCAATCGCCGGGTTTGGACAGCGCTTGCCCGAGACGTTGAAGGCGCGCACGCTGGGCATACAGGGCCTGATCGGGG CGGCCTTTTTGGCGTTCGCGCTCCTCACCTCGAACCCCTTCGCGACGCTCACCCCCGCCCCGGTGGAGGGGATGGATCTC AATCCGCTGCTGCAGGACCCGGGCTTGGCGTTCCATCCGCCCTTTCTCTACCTCGGATATGTCGGGTTTTCGGTCGCGTT TTCCTTTGCCCTTGCCGCCCTTCTCGAGGGACGGGTCGATCCGGCATGGGCGAGATGGGTGCGGCCCTGGACCTTGCTCG CCTGGACGGCCCTGACGATCGGTATCGGCCTTGGCGCCTTGTGGGCGTATATGGAGCTTGGCTGGGGCGGCTATTGGTTC TGGGACCCGGTCGAGAATGCCTCCCTGATGCCCTGGCTGGCGGGGACGGCCCTCTTGCACAGCGCGATTGTGGTCGAGAA GAGAAATACGCTGAAGCTGTGGACCGTGTTGATGGCCATCACGGCCTTTTCCGCGTCGCTGCTCGGCGCGTTTGTGGTGC GCTCGGGGGTCCTGACCTCGGTCCACGCCTTTGCCAACGACCCCGATCGCGGGGCCGTCCTTCTGCTGATTTTCGTGGTC CTGACGGGGGGCGCCCTCGTGCTATTCGCCTGGCGCGGCGGGGCGATGCAGGCCGAGGGGCGGTTTGCGGCGGTCAGCCG TGAAAGCGCGCTGATCCTCAACAATGTGGTCCTGGCGGTGGTGACCTTCACGGTCCTGATCGGCACCTTCTGGCCTCTTT TCCGCGAGGTCACGACCGGTGAGCGGATTACGGTGGGGCCCCCCTATTATTCAGCGGTCACAACCCCGCTTGTGGTCGTC CTCGCCCTTGTCATGGCGGCGGGGGTTATGCTGCCCTGGAAGCGGGGCTATCTGCGGGATCTCCCCCGTCGTCTCGCCGC CGCCCTCGGCATTACGGGCCTCTCAGTCCTCATCCTTGCCGTGACCGGGGGGCGCGGCGGGGTGATGGCCTTTGCCGGTT TGGCGACCGGGTGTTTCATCATCCTGCTGACAGTTTCCGATCTCGTGTCGCGGACCAAGCTTTTCTCGGCTGGTCCCGTG GCGGCTCTTCGCCGGGCGAAAGGGTTCCCCCGCGCCTATTGGGGCGGCTCCCTCGCCCATGCCGGGGTGGGGATCGCCAT CCTGGGTATGGTCGGGACAAGCCTTTGGGTGACCGAACGGCGGGTTGTTCTCTCCCCCGGCGAGATGACGAGCCTCGCCG GTTTCGAGGTGCGATATGAGGCGATACGGACGATCGCTGAGGCTAATTATACCACGGAGCGATCCACTTTTGCCCTTGAA CGCAATGGAAAGGTCGTTGCACGCCTGATGCCTGAGCGGCGGTGGTATCCCGCGGCCGAGCAGCAAACGGTCGAAGCCGC CGTACTGCCTCGGTGGGCGAACGACATCTATATTGCGGTGGGCGAGCCGAGGGGCGTTGAGGATGAAGCGCGGGTCGTCC GCCTTTACCACCACCCGCTCGCCCTTTGGCTATGGGGCGGTGGTCTCCTGATGGCGGCTGGCGGCGCCCTGTCCCTGACC GATCGCCGCTATCGTATCGGGGCCCCCGCAAAAAAGACCAAGCCGTCGGCGGGCGTGACGGCGGTGGGGGCTGCGCCGGG GCTCGCCGAATGA Protein sequence : MTSDIGQVSLILALLTALVQTGLGLWGGHRGDTALMSGASRAALCQAGLVVLAFAALTVAFIRSDFAILTVFQNSHTAKP LIYKIAGVWGNHEGSLLLWVMILAGLGAAIAGFGQRLPETLKARTLGIQGLIGAAFLAFALLTSNPFATLTPAPVEGMDL NPLLQDPGLAFHPPFLYLGYVGFSVAFSFALAALLEGRVDPAWARWVRPWTLLAWTALTIGIGLGALWAYMELGWGGYWF WDPVENASLMPWLAGTALLHSAIVVEKRNTLKLWTVLMAITAFSASLLGAFVVRSGVLTSVHAFANDPDRGAVLLLIFVV LTGGALVLFAWRGGAMQAEGRFAAVSRESALILNNVVLAVVTFTVLIGTFWPLFREVTTGERITVGPPYYSAVTTPLVVV LALVMAAGVMLPWKRGYLRDLPRRLAAALGITGLSVLILAVTGGRGGVMAFAGLATGCFIILLTVSDLVSRTKLFSAGPV AALRRAKGFPRAYWGGSLAHAGVGIAILGMVGTSLWVTERRVVLSPGEMTSLAGFEVRYEAIRTIAEANYTTERSTFALE RNGKVVARLMPERRWYPAAEQQTVEAAVLPRWANDIYIAVGEPRGVEDEARVVRLYHHPLALWLWGGGLLMAAGGALSLT DRRYRIGAPAKKTKPSAGVTAVGAAPGLAE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 3e-90 | 46 |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 2e-78 | 45 |
