Gene Information

Name : SPAP_0942 (SPAP_0942)
Accession : YP_003876533.1
Strain : Streptococcus pneumoniae AP200
Genome accession: NC_014494
Putative virulence/resistance : Resistance
Product : antimicrobial peptide ABC transporter ATPase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 898936 - 899694 bp
Length : 759 bp
Strand : +
Note : Operon 425 Gene 2 COG1136 ABC-type antimicrobial peptide transport system, ATPase component

DNA sequence : 
ATGACACTTTTAGATGTAAAACACGTTCAAAAAATTTATAAAACACGTTTTCAGGGCAACCAAGTAGAAGCCCTCAAGGA
TATTCACTTTACCGTCGAAAAGGGTGACTACGTTGCCATCATGGGTGAGTCTGGTTCTGGTAAATCAACTCTTCTCAATA
TTCTAGCTATGCTGGATAAACCAAGTCGTGGTCAGGTTTACTTGAATGGAACTGACACCGCAACCATTAAAAATTCACAG
GCCTCTAGCTTCCGTCGTGAAAAGTTGGGCTTTGTCTTCCAAGACTTTAACTTGCTAGATACTCTATCTGTAAAGGACAA
TATCTTGCTTCCGCTTGTCTTGTCAAGAAGACCTATTACAGAGATGATGAAGAAATTGGTGGTGACAGCTGAGAATCTGG
GAATAAACCAATTACAAGAGAAGTACCCTTACGAGATTTCTGGTGGCCAGAAACAGCGTGTAGCAGTAGCACGCGCCATC
ATCACTGAACCTGAAATTCTCCTTGCGGACGAACCGACAGGAGCTCTTGACTCCAAGTCATCTGCAGCCTTACTTGATGT
CTTTGATGAAATCAATGAGCGCGGCCAAACCATTCTCATGGTAACCCACTCAACAGCAGCAGCTAGCAGAGCTAAACGTG
TACTCTTTATCAAAGACGGCATTCTTTACAATCAAATCTACCGTGGAGAGAAGACAGAACGTCAGATGTTCCAAGAAATC
TCTGATACCTTGACTGTCATGGCAAGCGAGGTGAATTAG

Protein sequence : 
MTLLDVKHVQKIYKTRFQGNQVEALKDIHFTVEKGDYVAIMGESGSGKSTLLNILAMLDKPSRGQVYLNGTDTATIKNSQ
ASSFRREKLGFVFQDFNLLDTLSVKDNILLPLVLSRRPITEMMKKLVVTAENLGINQLQEKYPYEISGGQKQRVAVARAI
ITEPEILLADEPTGALDSKSSAALLDVFDEINERGQTILMVTHSTAAASRAKRVLFIKDGILYNQIYRGEKTERQMFQEI
SDTLTVMASEVN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-34 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SPAP_0942 YP_003876533.1 antimicrobial peptide ABC transporter ATPase CP001581.1.gene798.p Protein 9e-42 45
SPAP_0942 YP_003876533.1 antimicrobial peptide ABC transporter ATPase NC_012469.1.7686878. Protein 2e-39 43
SPAP_0942 YP_003876533.1 antimicrobial peptide ABC transporter ATPase NC_008702.1.4606598. Protein 1e-38 41