Gene Information

Name : Dda3937_01485 (Dda3937_01485)
Accession : YP_003881764.1
Strain : Dickeya dadantii 3937
Genome accession: NC_014500
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1066217 - 1066942 bp
Length : 726 bp
Strand : +
Note : -

DNA sequence : 
ATGCAGGAAGACCGGTTCGATACGCCACCGGGAACAGCGGCCCCCGGTTTGATACGGCTGGAACAGGTTAGCCATGCTTA
TCCCTCCGCGGCGGCATCGCACCCGGTTCTGCATAATGTTTCCCTGCGGGTTGACGCGGGGCAGAGCTGCGCCATCGTTG
GCGCTTCCGGCTCCGGGAAAAGCACGCTGCTGAACATTATCGGGCTGCTCGATAAACCCACGTCGGGGCGACTGTGGCTG
AATGGCTGCGACATGGCGCAGGCCTCGACCGATGAACGCGCCAGAATACGCAACCAGACTATCGGGTTCGTTTTTCAGAG
CTTTAATCTACTGCCGCGTCTTTCCGTGCTGGATAACGCGGCGCTGCCGCTGCTGTATCGCGGTGGCTCTCGCCGTGATG
CCCATCAGGCGGCCAGACGGCAACTGGAGCGGGTTGGGCTGGCCGAACGCCTCCATTACCGCCCGGCGGATCTGTCCGGC
GGCCAGCGACAGCGCGTCGCCATCGCCCGCGCGCTCACCGGCGAACCGTCACTGTTGCTGGCCGATGAACCCACCGGCAA
TCTCGATAGCCAGACCGCCGGCGATATTCTGTCGTTGTTGCTGACGCTGAACCGGGAACAAGGGGTGACGTTGGTGATGG
TTACGCATGACGAATCCATCGCCCGGCAGATGCAGCGTCGTATTCAGGTGAACGATGGCCGGGTTCAGGAATACAGTAAT
AGTTAA

Protein sequence : 
MQEDRFDTPPGTAAPGLIRLEQVSHAYPSAAASHPVLHNVSLRVDAGQSCAIVGASGSGKSTLLNIIGLLDKPTSGRLWL
NGCDMAQASTDERARIRNQTIGFVFQSFNLLPRLSVLDNAALPLLYRGGSRRDAHQAARRQLERVGLAERLHYRPADLSG
GQRQRVAIARALTGEPSLLLADEPTGNLDSQTAGDILSLLLTLNREQGVTLVMVTHDESIARQMQRRIQVNDGRVQEYSN
S

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-25 45
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 8e-26 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-26 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-26 44
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 4e-27 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dda3937_01485 YP_003881764.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 6e-45 52
Dda3937_01485 YP_003881764.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 4e-38 50
Dda3937_01485 YP_003881764.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 2e-35 47
Dda3937_01485 YP_003881764.1 ABC transporter ATP-binding protein NC_012469.1.7686946. Protein 3e-30 45
Dda3937_01485 YP_003881764.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 8e-36 42