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Name : secD (Dda3937_01950) Accession : YP_003881911.1 Strain : Dickeya dadantii 3937 Genome accession: NC_014500 Putative virulence/resistance : Unknown Product : secYEG protein translocase auxillary subunit Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0342 EC number : - Position : 1224373 - 1226220 bp Length : 1848 bp Strand : + Note : - DNA sequence : GTGTTAAACCGCTATCCTCTGTGGAAGTACCTGATGCTGATCGTGACGATCGTCGTTGGTCTGCTCTACGCACTTCCTAA CCTGTATGGTGAGGATCCGGCAATTCAGGTCACTGGCGCGCGAGGAACCGCCGCCAGTGAATCTACGCTGGTCCAGATCC AGAATGTTTTGAAAGAACAAAATGTCGCCAGCAAATCTATTGCGCTGGAAAACGGTGCCATTCTCGCGCGCTTCTCCACG CCGGACGTGCAGCTTCGCGCTCGTGAAGTTCTGCTGAACGCGCTGGGCGAGAAATTCGTGGTGGCGCTCAACCTGGCGCC GGCTACCCCGACCTGGCTGAGAATGCTGGGGGCGGAACCGATGAAACTGGGTCTTGACCTGCGTGGTGGTGTGCACTTCC TGATGGAAGTGGATATGGACACCGCGTTAGGCAAGCTGCAGGAGCAAACGATGGATTCCCTGCGCAGCGATCTGCGCGAG AAAGGTATCCAGTATGCTTCTGTTCGCAAGTCAGACAATTATGGCGTGGAAATTCTGTTCCGTGACGGCCAACTGCGTGA CGACGCGGTCACTTACCTGACCTCCCGCCATCGCGATCTGGTGATCAACGCCAGCGGCAGCGATACGCTGCGTGCGGTCA TGAGCGATGCCCGTCTGCGCGAAGCCCGCGAATATGCGGTGCAGCAGAACATCAACATCCTGCGCAACCGTGTTAACCAG CTCGGCGTAGCCGAACCGCTGGTACAGCGTCAGGGCGCCGACCGCATCGTGGTGGAACTGCCGGGGATTCAGGACACCGC GCGCGCCAAAGAAATTCTGGGCGCGACCGCTACGCTGGAGTTCCGTCTGGTCAACAGCAATGTCGACCCTGTTGCGCTGA GCAACGGCCGTGTGCCGGGCGACACCGAAGTGATGAATATGCGTGATGGCGGACCGGTAGCGCTGTACAAACGCGTGATT CTGACCGGCGACCACATCACCGACTCCACTTCCGGCAACGATGAATACAACCGTCCGCAGGTTAATATCTCGCTGGACAG CGCCGGCGGCAACGCGATGTCCAACTTCACCAAGGACAACATCGGTAAACCGATGGCGACCCTGTTTGTGGAGTATAAAG ACAGCGGCAAAAAAGACGCTAACGGCCGCGCGATTCTGGAAAAACAGGAAGAGGTGATTAACGTCGCCACTATTCAGTCC CGTCTGGGCAACAGCTTCCGTATTACCGGCATCGACAACCCGAATGAAGCCCGCCAGCTGTCGCTGTTGCTGCGCGCCGG CGCGCTGATTGCGCCGATTCAGATCGTGGAAGAGCGCACCATCGGCCCGACGTTGGGGATGCAAAACATCACCCAGGGGC TGGAAGCTTGTCTGGCTGGCCTGGCCGTGTCCATCCTGTTCATGATCTTCTTCTACAAGAAGTTCGGCATGATTGCGACG TCCGCGCTGTTATTGAACCTGGTGTTGGTTGTCGGCATTATGTCGCTGCTGCCGGGGGCTACCCTGACCATGCCGGGGAT AGCGGGTATCGTATTGACCCTTGCCGTGGCGGTGGATGCCAACGTACTGATTAACGAGCGCATCAAAGAAGAATTGAGCA ACGGGCGCACCGTTCAGCAGGCGATTGACGAGGGTTACCGGGGCGCGTTCAGCTCCATCTTCGATGCGAACGTCACGACG TTGATCAAGGTCATTATCCTGTATGCGGTCGGTACCGGCTCGATTAAAGGATTTGCGATTACGACCGGTATTGGCGTGGC GACATCCATGTTTACTGCGATCGTTGGTACCCGTGCCATCGTAAACCTGCTGTACGGCGGCAAGCGCGTCAAAAAGCTGT CTATCTGA Protein sequence : MLNRYPLWKYLMLIVTIVVGLLYALPNLYGEDPAIQVTGARGTAASESTLVQIQNVLKEQNVASKSIALENGAILARFST PDVQLRAREVLLNALGEKFVVALNLAPATPTWLRMLGAEPMKLGLDLRGGVHFLMEVDMDTALGKLQEQTMDSLRSDLRE KGIQYASVRKSDNYGVEILFRDGQLRDDAVTYLTSRHRDLVINASGSDTLRAVMSDARLREAREYAVQQNINILRNRVNQ LGVAEPLVQRQGADRIVVELPGIQDTARAKEILGATATLEFRLVNSNVDPVALSNGRVPGDTEVMNMRDGGPVALYKRVI LTGDHITDSTSGNDEYNRPQVNISLDSAGGNAMSNFTKDNIGKPMATLFVEYKDSGKKDANGRAILEKQEEVINVATIQS RLGNSFRITGIDNPNEARQLSLLLRAGALIAPIQIVEERTIGPTLGMQNITQGLEACLAGLAVSILFMIFFYKKFGMIAT SALLLNLVLVVGIMSLLPGATLTMPGIAGIVLTLAVAVDANVLINERIKEELSNGRTVQQAIDEGYRGAFSSIFDANVTT LIKVIILYAVGTGSIKGFAITTGIGVATSMFTAIVGTRAIVNLLYGGKRVKKLSI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 1e-125 | 48 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 1e-125 | 48 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 1e-125 | 48 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 7e-126 | 48 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 4e-126 | 48 |
