Gene Information

Name : Dda3937_01547 (Dda3937_01547)
Accession : YP_003882101.1
Strain : Dickeya dadantii 3937
Genome accession: NC_014500
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3272
EC number : -
Position : 1430267 - 1431226 bp
Length : 960 bp
Strand : +
Note : COG1683: Uncharacterized conserved protein / Hypothetical protein ybgA

DNA sequence : 
ATGACAGCCGATCTGATTCCCGTTGGCATCAGCGCCTGCCTGCTTGGCAATCCGGTGCGTTTTGATGGCGGTCATAAACG
ACTGGCCTTTGCCGTTGAGCAACTTGCTCCCTATTTCCATTTTGAACCGGTGTGCCCGGAGATGGCGATCGGCTTGCCGG
TGCCGCGCCCGGCATTGCGGCTGGTTAAGTCTGACGAAGGGGGCCTGCGTCTGCTGGCCAGCAATGGTTCCGGGTTGGAC
GTAACGGACAAAATGGCGGCGTTCTCCGCCGAAAAAGCGGCGCAGCTGGCACACCTGTGCGGTTATATCGTCTGCGCCAA
ATCGCCGAGCTGCGGTATGGAGCGGGTCAAAATTTACGATGCTGGTCAGCAGAACGCGCGTAAAAGCGGGGTGGGGCTGT
TTACCCAGCAGGTGAGGGAAACGCTGCCGTGGCTACCGGTGGAAGAAGACGGTCGCCTGCATGATCCGGCGCTGCGCGAG
AATTTCATTGCTAGAGTCTATGCGTTGCATGAATTCAACCAGTTATGGAAAAAAGGGTTGAGCCGCGGCGCGCTAATGGG
CTTCCATAGCCGTTATAAACTGCTGTTGCTGGCGCATTCGCAGCCGGAGTACCGCGAACTGGGGCCGTTTGTCGCCGCGA
TGGACCAGTGGGATTCACTGGAGGCGTTTGCTGAGCAGTACCGGTTGCGGTTGATGAGGCTGTTGTCGCACCCGGCTTCC
CGGCGCAATCACACCAATGTGCTGATGCACGTGCAGGGGTATTTCCGCCGTCAGTTGACCGCCGGACAGCGGCAGGAACT
GACCCAGTTGATCGATCGCTATCGTCAGGGGATGCAGCCGTTGCTGGCGCCGCTTACCCTGTTGCGTCATTACATGACGG
AGTACCCGGATGCCTGGCTGGCGCAGCAGCGCTATTTCGATCCTTACCCGGAGGCGCTGCGTTTGCGCTACGGGCACTAA

Protein sequence : 
MTADLIPVGISACLLGNPVRFDGGHKRLAFAVEQLAPYFHFEPVCPEMAIGLPVPRPALRLVKSDEGGLRLLASNGSGLD
VTDKMAAFSAEKAAQLAHLCGYIVCAKSPSCGMERVKIYDAGQQNARKSGVGLFTQQVRETLPWLPVEEDGRLHDPALRE
NFIARVYALHEFNQLWKKGLSRGALMGFHSRYKLLLLAHSQPEYRELGPFVAAMDQWDSLEAFAEQYRLRLMRLLSHPAS
RRNHTNVLMHVQGYFRRQLTAGQRQELTQLIDRYRQGMQPLLAPLTLLRHYMTEYPDAWLAQQRYFDPYPEALRLRYGH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orf319 NP_460354.1 inner membrane protein Not tested SPI-2 Protein 1e-94 60
STY1731 NP_456139.1 putative pathogenicity island protein Not tested SPI-2 Protein 1e-94 60
t1257 NP_805060.1 pathogenicity island protein Not tested SPI-2 Protein 1e-94 60
SC1410 YP_216397.1 inner membrane protein Not tested SPI-2 Protein 1e-94 60
ORF 319 CAB37410.1 - Not tested SPI-2 Protein 1e-94 60

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dda3937_01547 YP_003882101.1 hypothetical protein VFG0490 Protein 6e-95 60