Gene Information

Name : dspF (Dda3937_02946)
Accession : YP_003883117.1
Strain : Dickeya dadantii 3937
Genome accession: NC_014500
Putative virulence/resistance : Virulence
Product : protein DspF
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2507818 - 2508285 bp
Length : 468 bp
Strand : -
Note : -

DNA sequence :
ATGACATCAACGCACTTAGCCTCAACGCCTTCAGTCTCAACGCAAGCGACCTCGGCACAACAACTGGCGGCGCGGCTGCT
GCAACATTTTAGCCAGTTCAACCGGCAGCGCCTGATGCTGAATAACGGCATCTGTGTACTGAACGGCGCGGACGGTCGGG
AGGCGGCGGTGATTGAAGTGCCGGCGCACAGCGACAATCTGCTGCTGCACTGCCAGGTGGTGAGCCTGAAAGGCGAAGAC
CGGCTGGCTGTCTACCGCCTGATGCTGCTGCTCAATTTCGAGATGGCGGCGATGCGTGGTTGCTGGCTGGCGCTGGATGA
GTACGACAATCTGCGCCTGTGCAGTCAGTATCCGCTCGACAAACTGGATGAAGCGGGTTTTAGCGCGCTGATGAACGGCT
ACATTCGGCAGGTGGAAGAAACCCGCACGTTTATCGAGCAGACTCTGGCGGAAGTCAACGCCGCCTGA

Protein sequence :
MTSTHLASTPSVSTQATSAQQLAARLLQHFSQFNRQRLMLNNGICVLNGADGREAAVIEVPAHSDNLLLHCQVVSLKGED
RLAVYRLMLLLNFEMAAMRGCWLALDEYDNLRLCSQYPLDKLDEAGFSALMNGYIRQVEETRTFIEQTLAEVNAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dspF AAC04851.1 DspF Virulence Hrp PAI Protein 2e-27 50
avrF ABA47300.1 AvrF Not tested S-PAI Protein 7e-21 46
avrF AAT96351.1 AvrF Not tested S-PAI Protein 9e-19 46
avrF AAT96271.1 AvrF Not tested S-PAI Protein 8e-19 46
avrF AAT96312.1 AvrF Not tested S-PAI Protein 8e-19 46
avrF AAT96165.1 AvrF Not tested T-PAI Protein 4e-16 42
avrF AAT96219.1 AvrF Not tested T-PAI Protein 4e-16 42