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Name : hrcT (Dda3937_00617) Accession : YP_003883248.1 Strain : Dickeya dadantii 3937 Genome accession: NC_014500 Putative virulence/resistance : Virulence Product : type III secretion inner membrane protein Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG4791 EC number : - Position : 2659846 - 2660649 bp Length : 804 bp Strand : + Note : E. coli containing D. dadantii hrp cluster is capable of secreting an exogenous effector into tobacco, eliciting a hypersensitive response DNA sequence : ATGTTATCCATCGCCACTATCCAGAACATTTACGATTTTATTTACGCGCTGACGCTCGGCGTGGCCCGGCTTTATCCGTG CCTGTTTCTGGTGCCGCTGTTCTCGTTCACCATTATCAAAGGCATGCTGCGTAACGCGGTGGCGATCGCGCTGGCGCTGG TGCCAGCCGGCGCCATCCAGCAACAGATGCTGACCACCACCATTACCTGGCCGATGCTACCCGGCCTGCTGCTCAAAGAG CTGGTGATCGGGCTATTGCTGGGGGTAGTGCTGGCGATGCCGTTCTGGCTGTTCGAGTCGGTTGGCGCGTTGTTTGATAA CCAGCGCGGCGCGCTCACCGGCGGCCAGCTCAACCCGGCGCTGGGCAGCGACGCCACCCCGCTCGGCCACATGATGAAAG AACTGTTCATGATGATGCTGATCATCACCATCGGTTTTCCCGGCTTTACCCAGTTACTGTGGGACAGCTACCGCCTGTGG CCGGCGTTAGACTTTCTGCCGCCGTTATCGGAACAGGGGTTTCACACCTATCTCGACCTGCTCAAAGACACTTTCCAGCA CATGATCGTGTACGCCGGGCCGCTGGTGGCGTTGTTGCTGTTGCTGGAATTCAGTATCGCCATTCTCAGTCTCTACAGCC CGCAGTTGCAGGTGTATGTGCTGTCCACCCCGGCCAAATGTCTGGCCGGCATGGCGTTTTTCGTGCTCTACATGCCGGTG TTGCAGTTTCTCGGCGAGGGGCGGCTCAAGGCGCTGAGCGACCTGAAACACCTGCTCCCGCTGTTCTTTCAGGCATCCCC CTGA Protein sequence : MLSIATIQNIYDFIYALTLGVARLYPCLFLVPLFSFTIIKGMLRNAVAIALALVPAGAIQQQMLTTTITWPMLPGLLLKE LVIGLLLGVVLAMPFWLFESVGALFDNQRGALTGGQLNPALGSDATPLGHMMKELFMMMLIITIGFPGFTQLLWDSYRLW PALDFLPPLSEQGFHTYLDLLKDTFQHMIVYAGPLVALLLLLEFSIAILSLYSPQLQVYVLSTPAKCLAGMAFFVLYMPV LQFLGEGRLKALSDLKHLLPLFFQASP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcT | AAB06007.1 | HrcT | Virulence | Hrp PAI | Protein | 5e-57 | 62 |
| hrcT | AAT96345.1 | HrcT | Virulence | S-PAI | Protein | 7e-57 | 57 |
| hrcT | AAT96264.1 | HrcT | Virulence | S-PAI | Protein | 5e-57 | 57 |
| hrcT | AAT96305.1 | HrcT | Virulence | S-PAI | Protein | 5e-57 | 57 |
| hrcT | ABA47281.1 | HrcT | Virulence | S-PAI | Protein | 6e-57 | 57 |
| hrcT | ABQ88361.1 | HrcT | Virulence | Hrp PAI | Protein | 7e-45 | 49 |
| hrpX | AAB05077.1 | HrpX | Virulence | Hrp PAI | Protein | 7e-45 | 49 |
| hrcT | AAT96148.1 | HrcS | Virulence | T-PAI | Protein | 3e-44 | 48 |
| hrcT | AAT96202.1 | HrcT | Virulence | T-PAI | Protein | 3e-44 | 48 |
| hrcT | NP_791220.1 | type III secretion protein HrcT | Virulence | Hrp PAI | Protein | 1e-43 | 48 |
| hrcT | AAG33886.1 | HrcT | Virulence | Hrp PAI | Protein | 1e-43 | 48 |
