Gene Information

Name : rnhA (Dda3937_03974)
Accession : YP_003884196.1
Strain : Dickeya dadantii 3937
Genome accession: NC_014500
Putative virulence/resistance : Unknown
Product : ribonuclease HI
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0328
EC number : -
Position : 3667146 - 3667610 bp
Length : 465 bp
Strand : +
Note : degrades RNA of DNA-RNA hybrids

DNA sequence :
ATGCTAAAACAGGTAGAGATTTTCACCGACGGATCCTGCCTCGGCAATCCCGGTCCGGGTGGATATGGGGCGCTGCTGCG
TTACAAGCAGCACGAAAAAACCCTCAGCGCAGGTTACCGGCTCACCACCAATAACCGGATGGAATTGATGGCGGCGATCG
TCGCGCTGGAAACCCTGACCACACCTTGCGACGTGACCATCAGCACCGACAGCCAATACGTCCGTCAGGGCATAACCAGT
TGGATCCACAACTGGAAAAAGCGCGGCTGGAAAACCGCGGAGAAAAAACCGGTGAAAAACGTCGACCTGTGGCAACGGCT
GGATCAAGCTATTCAGCGTCATACCTTGCACTGGCAATGGGTGAAAGGCCATGCCGGCCATCCGGAGAACGAACGCTGCG
ATGAACTGGCTCGCCAGGCTGCCAGCGCACCCACCCTTGATGACACCGGTTATCAACCGGAGTAG

Protein sequence :
MLKQVEIFTDGSCLGNPGPGGYGALLRYKQHEKTLSAGYRLTTNNRMELMAAIVALETLTTPCDVTISTDSQYVRQGITS
WIHNWKKRGWKTAEKKPVKNVDLWQRLDQAIQRHTLHWQWVKGHAGHPENERCDELARQAASAPTLDDTGYQPE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rnhA AAO17224.1 RnhA Not tested tcd island Protein 2e-55 79