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Name : Saut_0318 (Saut_0318) Accession : YP_003891379.1 Strain : Sulfurimonas autotrophica DSM 16294 Genome accession: NC_014506 Putative virulence/resistance : Unknown Product : DNA-directed RNA polymerase subunit beta Function : - COG functional category : K : Transcription COG ID : COG0085 EC number : 2.7.7.6 Position : 290771 - 294916 bp Length : 4146 bp Strand : + Note : COGs: COG0085 DNA-directed RNA polymerase beta subunit/140 kD subunit; InterPro IPR007642:IPR007645:IPR007641:IPR007644:IPR 019462:IPR007120:IPR007121:IPR010243; KEGG: tdn:Suden_0353 DNA-directed RNA polymerase subunit beta; PFAM: RNA polymerase Rpb2 doma DNA sequence : ATGTTAAACACTTTATATTCCGGAAACCGTCTTCGTGTAGACTTCTCTAAAACTCCTCAAGAAATTGAAGTACCAAATTT ACTCCAACTGCAACAAAGTTCATATGACACATTTTTGATGTTACATGCAAAAAACAGAAGCCAAAGCGGTATTGAAAAAG TATTTCAATCAGTATTTCCTATTCATGATGCACAAAACAGGTTAACTGTTGAGTATATTGAGTCAGAAGTAACAAATCCA AAATATACAGTTCGTGAGTGTATGGAGAGAGGGCTTACATATGCAGTAAGTCTTAGAATGAAAACTCGTCTTATCTTATG GGAAAGAGATGAAAATACAAAAGAAAAGCTTGGTGTAGCAGATATTAAGGAACAAAGTATATTTGTTCGTGATATTCCAT TAATGACAGAAAGAACATCATTTATAATCAATGGTGTTGAACGTGTTGTTGTAAATCAACTTCACCGCTCACCGGGTGTT ATTTTCAAAGAAGAAGAATCTTCTACAGCAGGAAATAAACTGATCTATACTGGTCAAATCATTCCAGACCGCGGTTCATG GTTGTATTTTGAATATGATCCTAAAGATATTCTTTACATGAGAATTAACAAACGCCGTAAAGTGCCTGTAACAATAATGT TCCGTGCTTTAGGCTATTCTAAACAAGATATTTTAAAACTGTTTTACCCAATTCAGACAATAAAAATACATGATAATATG TTCTCTATAGATTTCAACCCTAAAGATTATGCGTCACGTATCTCTTATGATTTGATTGATATGAATGACAAAGTACTAGT ATCTTCAGGAAAAAGACTCTCATCTAAAAAAGCACAAAAGCTTTTAGATGACGGTGTAAAAGAAGTTCAATATCCACTAG AAATACTTTTAGAAAGATATCTTGCTGAATCGATTATTGACCCTGAAACCGGTGAAGTTCTTTTTGATACAATGACTCAT ATCGATGAGACTAAATTAAAGAAAATGGCTGAAATTGGTGTCACTGAGTTTAAAATCGCAAATGATATAGCAGAAGGTGT TGACAGTTCTATAATCAATGCATTCAATGCTGATGCAGATTCACTCAAACTTTTAAAGCAAACAGAAGAAATTGAAGATG AAAACGACTTAGCTGCGATTCGTATATATAAAGTTATGCGTCCGGGTGAGCCTGTTACAAAAGAGGCTGCAAAAATATTT GTAAATCAACTTTTCTTTGATCCTGAAAGATATGATTTGACTCAGGTTGGTCGTATGAAAATGAATCATAAGTTAGGAAT GAATATTCCGGAATATGTAACAGTTTTAACACATGAAGATATTATTGAATCTGTGAAATATGTTATAAAAGTTAAAAACG GTCAGGGGCACTTAGATGACAGAGATCACTTAGGTAACCGTCGTATTCGTTCTATCGGTGAGCTTTTAGGAAACGAGTTA CACAATGGTCTTGTAAAAATGCAAAAAGCGATTCGTGACAAACTCTCTACTATGAGTGGACCGATGAATGAGCTTATGCC GCATGATTTGATTAACTCAAAAATGATTACGTCTACAATTATGGAATTCTTTTCCGGTGGACAGCTTTCTCAGTTTATGG ATCAAACGAATCCGCTCTCTGAGGTAACCCACAAACGTCGTCTTTCAGCACTCGGTGAAGGTGGTCTTGTTAAAGAGAGA GCCGGCTTTGAAGTGCGGGATGTTCACCCTACTCACTATGGTAGAATATGCCCGGTTGAGACTCCAGAGGGTCAAAATAT CGGTCTTATCAATACACTTGCAATGTATGCAAAAGTAAATGAGCATGGTTTCATTGAAGCACCATACAAAGTTATGAAAG ATGGAAAAGTTACACATGAAATTGTTTACCTGACTGCAACGCAGGAAGAGGGCAAAATGATTGCTGCTGCTTCAAATAAA CTTGATGAAAATGGTCAGTTTATTGAAGACTTGATTGCTGTAAGACAAGATGGTGAAATTCTTTTAAGAGATCCAAAAGA GTGTGAATATGCTGACCTTTCTTCTCAAATGGTTATCGGTGTGGCAGCTTCTCTTATTCCATTCTTGGAACATGATGATG CCAACCGTGCACTTATGGGATCAAATATGCAGCGTCAGGCTGTCCCTCTTTTACGTGCAAATGCTCCAATGGTTGGAACA GGTATTGAAAAACTTGTTGCCCGTGATGCATGGGAGTGTGTAAAAGCAAAACGTGCAGGTAAAATAGAAAAAGTTGACGG AAAACACATCTATGTAATGGGTGAAGAAGATGGAGAAATTTTTATCGATTACTATCCATTACAAAAAAATCTTCGTACCA ACCAAAATACATCATTTACACAAAAACCGATTGTAAAAATCGGAGAAATGGTAGAAAAAGGTCAAATAATTGCTGATGGT CCGAATATGGATCAGGGGGAACTTGCACTCGGTGTAAATGCTATGGTTGCCTTTATGCCATGGAATGGATACAACTTTGA GGATGCGATTGTTATCTCAGAGCGTTTAATTCGCCAAGATGCATTTACTTCAGTACATATTTATGAAAAAGAAGTCGAAG CACGTGAACTTAAACACGGTGTCGAAGAGATTACTCGTGACATTCCAAATGTGCGTGATGATGAATTGGCTCATTTAGAT GAAAGCGGTATTGTTAAAATCGGTACAACTGTGAGTGGAGGTATGATTTTAGTAGGGAAAGTTTCTCCAAAAGGTGAAGT GAAGCCAACTCCTGAAGAGCGTCTTTTACGTGCAATTTTTGGTGAAAAAGCCGGACATGTTGTCAATAAATCACTCTACT GCCCACCGTCGATGGAGGGTGTTGTTGTAGATATTAAAGTATTTACGAAAAAAGGCTATGACAAAGATCCTCGTGCATTG GAACTTGAAAAAGAAGAGAGAGATTATTTAGAGCGTGAGCATTATGACAGACTTATCATGATTGATAAAGAAGAGATGCT TCGTGTTACAAAACTTTTAACTCGTGAACCATTGCAAAGTGACATTAAAATAGGTGATACTGAGTATAAAGCAGGAGACA CAATTAATGGAGATGATTTAAAAGAAGTGAATCGTTTTGCTATGAATGCGATTGTTAAATCTTTTTCACAAGAGATACAG GATGAGTACAACAAAACGAAAAATCATTTCCAAAAGCAAAAAAGAATTTTTAGAGATGAGCATGAAGAAAAATTAACGAT TTTAGAAAAAGATGACATCTTACCAAACGGTGTAGTGAAGTATGTAAAAATTTACATCGCTACAAAACGTCACCTCAAAG TCGGTGATAAAATGGCAGGTCGTCACGGAAATAAAGGTATCGTTTCAAATATTGTTCCGGAAGTTGATATGCCGTATATG GAAGACGGACGTAGTGTTGATGTGTGTCTGAATCCGCTTGGTGTACCTTCTCGTATGAATATCGGTCAGATTTTGGAGAT GCACCTTGGTATGGCAGGACGTGAGCTTGGAAACCAGATTCAAGAGCAGTTTGAAGCAAAACAAAAAGATTTTATAGATG ATCTTCGTGCAAAAATGATTGAAATAGCAGATGTAGCAGGAATGATGCATGCAAGCAAAGTAATCGGTGAAATGGATGAT GAGACTTTCTTAAAATATGCAAGAGACTGGTCAAAAGGTGTGAAATTCGCAACACCTATTTTTGAAGGTACAGATGCAAA AGAGTTTGAAAAACTTTATGAACTGGCAAAAATGGACAGTGACGGTAAACGCGTTTTATATGATGGAAAAACGGGTGAGA AGATGAAAGAGCGTGTAAATGTCGGTTACATGTATATCTTGAAACTGCACCACTTGGTTGATGAAAAAATTCACGCACGT TCAACAGGACCATATTCACTTGTTACACAACAACCGGTCGGCGGTAAAGCACTCTTTGGTGGACAAAGATTTGGTGAGAT GGAAGTCTGGGCTCTTGAAGCATATGGAGCATCAGCAGTTCTAAAAGAGATGTTGACTATCAAATCAGATGATGTTGATG GTCGTGTACGTGCGTATAAAGCACTTACAAAAGGTGAGTTAGTACCAGAATCTGGTATTCCTGAAACACTATTTGTATTA ACAAAAGAGCTTCAAGCATTGGCTCTTGATGTAGAGATTATGGACGAGGTAGAAGACGATGAGTAA Protein sequence : MLNTLYSGNRLRVDFSKTPQEIEVPNLLQLQQSSYDTFLMLHAKNRSQSGIEKVFQSVFPIHDAQNRLTVEYIESEVTNP KYTVRECMERGLTYAVSLRMKTRLILWERDENTKEKLGVADIKEQSIFVRDIPLMTERTSFIINGVERVVVNQLHRSPGV IFKEEESSTAGNKLIYTGQIIPDRGSWLYFEYDPKDILYMRINKRRKVPVTIMFRALGYSKQDILKLFYPIQTIKIHDNM FSIDFNPKDYASRISYDLIDMNDKVLVSSGKRLSSKKAQKLLDDGVKEVQYPLEILLERYLAESIIDPETGEVLFDTMTH IDETKLKKMAEIGVTEFKIANDIAEGVDSSIINAFNADADSLKLLKQTEEIEDENDLAAIRIYKVMRPGEPVTKEAAKIF VNQLFFDPERYDLTQVGRMKMNHKLGMNIPEYVTVLTHEDIIESVKYVIKVKNGQGHLDDRDHLGNRRIRSIGELLGNEL HNGLVKMQKAIRDKLSTMSGPMNELMPHDLINSKMITSTIMEFFSGGQLSQFMDQTNPLSEVTHKRRLSALGEGGLVKER AGFEVRDVHPTHYGRICPVETPEGQNIGLINTLAMYAKVNEHGFIEAPYKVMKDGKVTHEIVYLTATQEEGKMIAAASNK LDENGQFIEDLIAVRQDGEILLRDPKECEYADLSSQMVIGVAASLIPFLEHDDANRALMGSNMQRQAVPLLRANAPMVGT GIEKLVARDAWECVKAKRAGKIEKVDGKHIYVMGEEDGEIFIDYYPLQKNLRTNQNTSFTQKPIVKIGEMVEKGQIIADG PNMDQGELALGVNAMVAFMPWNGYNFEDAIVISERLIRQDAFTSVHIYEKEVEARELKHGVEEITRDIPNVRDDELAHLD ESGIVKIGTTVSGGMILVGKVSPKGEVKPTPEERLLRAIFGEKAGHVVNKSLYCPPSMEGVVVDIKVFTKKGYDKDPRAL ELEKEERDYLEREHYDRLIMIDKEEMLRVTKLLTREPLQSDIKIGDTEYKAGDTINGDDLKEVNRFAMNAIVKSFSQEIQ DEYNKTKNHFQKQKRIFRDEHEEKLTILEKDDILPNGVVKYVKIYIATKRHLKVGDKMAGRHGNKGIVSNIVPEVDMPYM EDGRSVDVCLNPLGVPSRMNIGQILEMHLGMAGRELGNQIQEQFEAKQKDFIDDLRAKMIEIADVAGMMHASKVIGEMDD ETFLKYARDWSKGVKFATPIFEGTDAKEFEKLYELAKMDSDGKRVLYDGKTGEKMKERVNVGYMYILKLHHLVDEKIHAR STGPYSLVTQQPVGGKALFGGQRFGEMEVWALEAYGASAVLKEMLTIKSDDVDGRVRAYKALTKGELVPESGIPETLFVL TKELQALALDVEIMDEVEDDE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00346 | YP_008207811.1 | DNA-directed RNA polymerase, beta subunit/140 kD subunit | Not tested | AbaR25 | Protein | 0.0 | 48 |
| BJAB0868_00350 | YP_008211676.1 | DNA-directed RNA polymerase, beta subunit/140 kD subunit | Not tested | AbaR26 | Protein | 0.0 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Saut_0318 | YP_003891379.1 | DNA-directed RNA polymerase subunit beta | NC_009085.4918494.p0 | Protein | 0.0 | 48 |
| Saut_0318 | YP_003891379.1 | DNA-directed RNA polymerase subunit beta | CP004022.1.gene2794. | Protein | 0.0 | 48 |
| Saut_0318 | YP_003891379.1 | DNA-directed RNA polymerase subunit beta | NC_010410.6003841.p0 | Protein | 0.0 | 48 |
| Saut_0318 | YP_003891379.1 | DNA-directed RNA polymerase subunit beta | NC_011586.7046027.p0 | Protein | 0.0 | 48 |
| Saut_0318 | YP_003891379.1 | DNA-directed RNA polymerase subunit beta | NC_010400.5987325.p0 | Protein | 0.0 | 48 |
| Saut_0318 | YP_003891379.1 | DNA-directed RNA polymerase subunit beta | NC_002516.2.881699.p | Protein | 0.0 | 48 |
| Saut_0318 | YP_003891379.1 | DNA-directed RNA polymerase subunit beta | NC_010611.6233925.p0 | Protein | 0.0 | 48 |
| Saut_0318 | YP_003891379.1 | DNA-directed RNA polymerase subunit beta | NC_011595.7060572.p0 | Protein | 0.0 | 48 |
| Saut_0318 | YP_003891379.1 | DNA-directed RNA polymerase subunit beta | CP000675.2.gene392.p | Protein | 0.0 | 48 |
| Saut_0318 | YP_003891379.1 | DNA-directed RNA polymerase subunit beta | CP000034.1.gene3741. | Protein | 0.0 | 47 |
| Saut_0318 | YP_003891379.1 | DNA-directed RNA polymerase subunit beta | CP001138.1.gene4362. | Protein | 0.0 | 47 |
| Saut_0318 | YP_003891379.1 | DNA-directed RNA polymerase subunit beta | NC_002695.1.914942.p | Protein | 0.0 | 47 |
| Saut_0318 | YP_003891379.1 | DNA-directed RNA polymerase subunit beta | CP001918.1.gene250.p | Protein | 0.0 | 47 |
| Saut_0318 | YP_003891379.1 | DNA-directed RNA polymerase subunit beta | CP002695.1.gene18.p0 | Protein | 0.0 | 47 |
| Saut_0318 | YP_003891379.1 | DNA-directed RNA polymerase subunit beta | CP000647.1.gene4402. | Protein | 0.0 | 47 |
| Saut_0318 | YP_003891379.1 | DNA-directed RNA polymerase subunit beta | NC_011035.1.6448762. | Protein | 0.0 | 46 |
| Saut_0318 | YP_003891379.1 | DNA-directed RNA polymerase subunit beta | NC_008702.1.4609796. | Protein | 0.0 | 46 |
| Saut_0318 | YP_003891379.1 | DNA-directed RNA polymerase subunit beta | CP003583.1.gene2745. | Protein | 4e-159 | 41 |
