Gene Information

Name : Mpet_1087 (Mpet_1087)
Accession : YP_003894292.1
Strain : Methanoplanus petrolearius DSM 11571
Genome accession: NC_014507
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1106853 - 1107530 bp
Length : 678 bp
Strand : -
Note : COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003593:IPR003439:IPR017871:IPR013055; KEGG: mem:Memar_2200 ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter

DNA sequence :
ATGATAACTACAGATGGTCTCAAAAAATACTATACAATGGGCGACGTCGAAGTTCGTGCATTAAACGGGGTAAGTATACA
GATAGAAAAAGGCGAGTTTGTCGGTTTGATGGGACCTTCCGGCTCGGGAAAATCCACCCTTTTACATATGATCGGCCTCC
TTGACCGACCGACTTCCGGTGGGATCTTTATTGATGACAAGGATGTCAATTCCCTGTCCGATGAACAGAGAACGATGTTC
AGGCTGAATAAACTAGGGTACGTATTCCAGGATTACGCACTAATACCCGAACTTACGGTACTTGAAAATGTTTGCCTGTG
CTCTATGGTCAGAGGTGAGGATATTTTGGATTATACAACCAAAGGGATGAATATTTTGAATATCATCGGTCTTTCCGAAA
GGACAGGTCACCTCCAGAGGGAGCTTTCGGGAGGCCAGCAGCAGAGGGTTGCGATCGCCAGAGCAATGGTCAGCAGACCA
GACATTCTTTTTGCCGACGAACCCTGTGCTAATCTGGATAGTGTAAACTCAAGGATGGTTCTTGACCTTTGTAAGAAGAT
CAACACCGAGATGAACCAGACAATTGTTATGGTCTCTCATGAGGACTGGCACAGGGAATATTTTGACAAAGTAATATACC
TGAAGGACGGTGTCGTTGATTCTATAATAGAGATGTGA

Protein sequence :
MITTDGLKKYYTMGDVEVRALNGVSIQIEKGEFVGLMGPSGSGKSTLLHMIGLLDRPTSGGIFIDDKDVNSLSDEQRTMF
RLNKLGYVFQDYALIPELTVLENVCLCSMVRGEDILDYTTKGMNILNIIGLSERTGHLQRELSGGQQQRVAIARAMVSRP
DILFADEPCANLDSVNSRMVLDLCKKINTEMNQTIVMVSHEDWHREYFDKVIYLKDGVVDSIIEM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 4e-28 43
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-28 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mpet_1087 YP_003894292.1 ABC transporter-like protein CP001581.1.gene598.p Protein 1e-42 46
Mpet_1087 YP_003894292.1 ABC transporter-like protein NC_008702.1.4606598. Protein 6e-33 44
Mpet_1087 YP_003894292.1 ABC transporter-like protein CP001581.1.gene798.p Protein 6e-41 43
Mpet_1087 YP_003894292.1 ABC transporter-like protein NC_012469.1.7686878. Protein 5e-37 42