|
Name : lasT (HELO_2876) Accession : YP_003897945.1 Strain : Halomonas elongata DSM 2581 Genome accession: NC_014532 Putative virulence/resistance : Unknown Product : SpoU-family rRNA methylase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0565 EC number : 2.1.1.- Position : 2190813 - 2191547 bp Length : 735 bp Strand : + Note : tRNA - Enterobacter sakazakii (strain ATCC BAA-894),InterPro: RNA methyltransferase TrmH group 1, High confidence in function and specificity DNA sequence : ATGTTGTCGAACATCCGCATCGTTCTCGTCCAGACCTACCACCCCGGTAACATCGGCGCCTCGGCGCGGGCCATGAAGAC CATGGGACTCACCGATCTGGTACTGGTCAATCCCCGCTGTTTCCCCGATCCCGAGGCCTCCAGGCTCGCCGCTGGGGCCG AGGACGTCGTCGACCAGGCTCGCGTCGTCACCTCGCTGAGCGAAGCGGTAGCCGACTGCGTGCAGGTGGTGGGCGCCAGC GCACGGCTGCGCAGCTATCCTTTGCCCCACTACGACGAACCCGCGGAGATGGCCACCAGCCTGGTCGACAATGCACGGGA AGCGCCCGTGGCACTGGTCTTCGGACGCGAGCGGTTCGGCCTGACCAACGATGAGATTCGTGACTGCAGCCACCAGGTCA GCATTCCCGCCAACCCGGACTACGGCGTGCTCAACCTGTCCCAGGCCGTACAGGTTCTGGCCTACGAGACCTTCGGCGCC TGGCGTCGCCTCCCCGACAGCGACTATCAGCACCCTCGTCACGCCTCGGTCCCCTTGCCCACCCGCCAGCAGCTCGGCCA CTTTCATGACCATCTCTCGCGAGTCATGCAGGCCAGCGGCTTCATCACCCAGCCCCATGCCCGCACCGAGGAACAGTTGC GCGCCCTGTTCGACCGCGCCCAACCCACGAGGCGCGATATCTCGCTGCTGCGCGGTTTGCTGAGCTCTCTGGAGGAAGGC ATTCAGGACGAGTGA Protein sequence : MLSNIRIVLVQTYHPGNIGASARAMKTMGLTDLVLVNPRCFPDPEASRLAAGAEDVVDQARVVTSLSEAVADCVQVVGAS ARLRSYPLPHYDEPAEMATSLVDNAREAPVALVFGRERFGLTNDEIRDCSHQVSIPANPDYGVLNLSQAVQVLAYETFGA WRRLPDSDYQHPRHASVPLPTRQQLGHFHDHLSRVMQASGFITQPHARTEEQLRALFDRAQPTRRDISLLRGLLSSLEEG IQDE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAT96063.1 | group 1 trmH family protein | Not tested | T-PAI | Protein | 4e-41 | 45 |
