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Name : ccmF (HELO_3725) Accession : YP_003898794.1 Strain : Halomonas elongata DSM 2581 Genome accession: NC_014532 Putative virulence/resistance : Unknown Product : cytochrome C biogenesis protein CcmF Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1138 EC number : - Position : 3198525 - 3200528 bp Length : 2004 bp Strand : - Note : cytochrome C biogenesis protein ccmF -Pseudomonas fluorescens,InterPro: cytochrome C biogenesis protein CcmF, High confidence in function and specificity DNA sequence : ATGCTGATCGAAATGATCCCCGAGATCGGCCATTTCGCCTTGATCATCGCCCTGTTGATGGCGGCGGTGCAGGGGTGCGT GCCGCTGGCCGGGGCCGCGACCCGTCGGCCGTTGTGGATGGCCTATGCGCGTCCCATGGCGACCGGCCAGTTCGCCTTTC TGGTCGTTGCCTATGCCTGCCTGACGGCCAGCTATCTGCTGGATGACTTCAGCGTGGCCACGGTGGCCAACAATTCGAAC TCGATGCTGCCCTGGTACTACAAGTTCAGTGCCGTCTGGGGCAACCACGAGGGCTCTGTACTGTTGTGGAGCCTGATCCT CGGCGCCTGGACCTACGCCGTCTCGCGCTTTTCCCGGGAGCTGCCCCGGGACATGCTGGCCCGGGTGCTGGGGGTGATGG GGCTGATCAGCACGGGATTTCTGACCTTCGTGCTGGCGACGTCCAATCCCTTCGCGCGGCTGTTGCCGAACGTGCCGTCC GATGGCGCCGACCTGAATCCGCTGCTGCAGGACTTCGGCCTGATCATCCATCCGCCGATGCTCTACATGGGATATGTCGG TTTCTCGGTGGTCTTCGCCTTCGCCATCGCCGCGCTGCTTGGCGGTCGCCTGGATGCCGCCTGGACCCGCTGGGCACGGC CCTGGACCAATGTCGCCTGGGCTTTCCTCACCGTGGGCATCGCGCTGGGTAGCTGGTGGGCCTATTACGAACTCGGCTGG GGCGGCTGGTGGTTCTGGGATCCGGTGGAGAATGCCTCCCTGCTGCCCTGGCTGGCCGGTACCGCGCTCATCCATTCCCT GGCGGTGACCGAGAAGCGCGGGAGCTTCAAGAGCTGGACGGTGTTGCTGGCCATCTCGACCTTTTCGCTGTCGTTGATGG GGACCTTCCTGGTGCGTTCGGGCGTGCTCACCTCGGTGCACGCCTTCGCTAACGACCCGTCGCGGGGGCTTTTCATTCTG GTGTTGCTGGGCATCACCGTGGGGGCGTCCTTGCTGCTGTTCGCGCTGCGTGCGCCCCGAGTCAGCCAGCGAACGGGCTT TGCCTGGCTGTCCCGCGATGCGCTGCTGCTGATCAACAACATCCTGCTGGTGATCATGACGGTCACCGTGCTGCTGGGCA CGCTCTATCCGTTGCTGCTCGATGCCTTCGGGCTGGGCAAGATCAGCGTCGGCCCCCCTTATTTCAACGCCCTGTTCGTA CCGCTGACGGTGCTGCTCTGCATCTTCATGGGACTGGGGCCGCTGGCGCAGTGGAAACGTACGCGCACACGCACGCTCTG GCAGCGCACCTGGCTGGCCGGTGGCATGGCCCTGATCATCGCCGGGGCGATACCGCTGCTGTACGACGGCGAGTGGAACC TGCGGGTCTCGCTGGGGCTGGCGGCGGCGCTATGGATCGTGTTGCCCATGCTGCGCGGCCTGCTGGACAGGATGCACCAG GGCACCTCGAAGCTGGCCGCCCTGCGCAAGCAGTCGCTGGCCTACTGGGGCATGCTGCTGGCGCACCTGGGCGTGGCGGT GACCATCGTCGGGGTCAGCGTGGTCGCCAATTATTCCGTCGAGCGCAATGTCCGCATGGGCGTCGGCGATACGGCCAGCC TGGCCGGCTACACCTTCACCCTGACCGAGCTCGGTGAGCGTCGCGGCCCCAATTTCATCGCCGATACGGCCCGCCTCGAG GTGCAGCGCGGCGATGACGATCGCCACTTCGTGATGATGCCGGAGAAGCGCCTGTATCTTGCCACCGGCATGCCGATGAC CGATGTCGCCCTGCGCCCGGGACCGCTGCGGGATCTCTACGTGGCCATGGGCGAGGATCTGGGTGATGGCAGCTGGGCCT TGCGCCTCCAGTACAAGCCGCTGGTGCGCTGGTTGTGGCTGGGCGGTCTGCTGATGGCCATCGGTGGCATCCTGGCGGTG ATCGACCGCCGCTATCGTCGCGCAGCCACCGCCCGCGACCCGGAACGTGCCGCCCTGACGAATGCGCGGGAGGCCAGTGC ATGA Protein sequence : MLIEMIPEIGHFALIIALLMAAVQGCVPLAGAATRRPLWMAYARPMATGQFAFLVVAYACLTASYLLDDFSVATVANNSN SMLPWYYKFSAVWGNHEGSVLLWSLILGAWTYAVSRFSRELPRDMLARVLGVMGLISTGFLTFVLATSNPFARLLPNVPS DGADLNPLLQDFGLIIHPPMLYMGYVGFSVVFAFAIAALLGGRLDAAWTRWARPWTNVAWAFLTVGIALGSWWAYYELGW GGWWFWDPVENASLLPWLAGTALIHSLAVTEKRGSFKSWTVLLAISTFSLSLMGTFLVRSGVLTSVHAFANDPSRGLFIL VLLGITVGASLLLFALRAPRVSQRTGFAWLSRDALLLINNILLVIMTVTVLLGTLYPLLLDAFGLGKISVGPPYFNALFV PLTVLLCIFMGLGPLAQWKRTRTRTLWQRTWLAGGMALIIAGAIPLLYDGEWNLRVSLGLAAALWIVLPMLRGLLDRMHQ GTSKLAALRKQSLAYWGMLLAHLGVAVTIVGVSVVANYSVERNVRMGVGDTASLAGYTFTLTELGERRGPNFIADTARLE VQRGDDDRHFVMMPEKRLYLATGMPMTDVALRPGPLRDLYVAMGEDLGDGSWALRLQYKPLVRWLWLGGLLMAIGGILAV IDRRYRRAATARDPERAALTNAREASA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 5e-137 | 57 |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 8e-117 | 53 |
