Gene Information

Name : glcB (HELO_4288)
Accession : YP_003899357.1
Strain : Halomonas elongata DSM 2581
Genome accession: NC_014532
Putative virulence/resistance : Unknown
Product : malate synthase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG2225
EC number : 2.3.3.9
Position : 3852990 - 3855164 bp
Length : 2175 bp
Strand : -
Note : -

DNA sequence :
ATGACCCAACGCATCACCCGCCATCGCCTTCAAGTGGCCGCCGAGCTGGACCGCTTCATCAACGAACAGGCTCTGCCGGG
AACCGGTGTCGATCCCGAAGCCTTCTGGGCCGGCGTGGACGCCCTCTTTCACGATTTGACACCCCAAAACCGCGAATTGC
TCGCCGAGCGGGAGCGCCTGCAGGCCGAGCTCGATACCTGGCACCGCGACAACGCAGGGCCGGTACGTGACATGGCGGCC
TATCGCGCCTTTCTCGAGAAGATCGGTTATCTGGTCGAGGCGCCGGCGAATGTCGAGGTCACCACCACCAAGGTGGATCG
CGAGATCGCCGTGCAGGCCGGACCGCAGCTGGTGGTGCCGGTCAACAATGCCCGCTATGCCCTGAATGCCGCCAATGCGC
GTTGGGGCAGCCTGTACGACGCCCTGTATGGCACCGACGCCATCGCCGATACGGAAGGCGCCGAGCGTGGCGAGAGCTTC
AACCCCAAGCGTGCCGAGAAGGTGATCGCCTATGCCCGGGGCGTGCTGGATCGCGCCGCTCCCCTGGCCACCGGTTCCCA
TGGCGAGGCGGTCAAGTATGCCCTGCGCGACGGGCATCTCGTCGTCACTCTTGAGGGCGGCCGCGAGACCGGCCTCAAGG
AACCCGGCAAGCTGGTGGGCTTCCAGGGGGAAGCCGAAGCGCCCGATGCGGTGCTGCTGGCCAATCACGACCTGCATCTG
GAGATCCAGATCGATGCCGGCCATCCCATCGGCAAGACCGATCCCGCCGGAGTCAAGGACGTGGTCGTGGAGGCGGCGCT
GACCTCCATCATGGACTGCGAGGACTCCGTGGCCGCGGTGGATGCCGAAGACAAGGTCGAGGTCTACGCCAATTGGCTGG
GCCTGATGAAGGGTGACCTGGAAACCCAGATCGACAAGGGTGGCAAGACCTTCACGCGTCGTCTCAACGATGATCGTACC
TGGCGTAATCCCGCGGGTGGCGAAGTGACCCTGCCGGGACGCTCATTGCTGTTCGTGCGCAATGTCGGCCATCTCATGAC
CACGCCGGCGGTACTCGATGCCGAGGGCAATGAACTGCCTGAGGGCATCCTCGATGCCGTCGTCACCAGCCTGATCGCCC
TGCACGACCTGGCCAAGGGCGAGGGTGAGCCGCGCAACTCCCGCGAGGGCTCGGTGTACATCGTCAAGCCCAAGATGCAT
GGCCCGAAGGAAGTCGCCTTCGCCGATACGCTCTTCGAGCGCGTCGAAGACCTGCTGGGCATGACCCGCGACACCCTGAA
GATGGGCATCATGGACGAGGAACGCCGCACCTCGGTGAACCTCAAGGCATGTATCGCCGAGGCCACTTCGCGCGTGGTGT
TCATCAACACCGGCTTCCTCGATCGCACCGGCGACGAGATGCACTCGACCATGGAAGCCGGCCCGATGATCCGCAAGGGA
GACATGAAGAATAGCGCCTGGATCGGTGCCTACGAGCGCAGCAACGTCCAGACCGGCCTGGCCTGCGGGCTGCGGGGCCA
CGCCCAGATCGGCAAGGGTATGTGGGCCATGCCGGATCTGATGGCGGCGATGCTCGAGCAGAAGATCGGCCACCCCAAGG
CCGGCGCCAACACTGCCTGGGTGCCATCTCCCACGGCGGCCACCCTGCATGCGCTGCATTATCACCAGGTCAGCGTGGCC
GAGGTGCAGCGCGAGCTCGAGACCCAGGGAGAACCCGATTGCCTGGACGAGCTGCTGACCGTGCCGGTGGCCGAGCGCCC
GGACTGGAGCGACGACGAGATTCAGCAGGAGCTCGACAACAACTGCCAGGGGATCCTCGGCTATGTGGTGCGCTGGGTCG
AGCACGGCGTGGGGTGCTCCAAGGTGCCGGATATCCATGATGTCGGCCTGATGGAGGATCGCGCGACCCTGCGTATCTCC
AGCCAGCACGTGGCCAACTGGTTGCACCACGGCGTGGTGGACGAGGCCCGGGTGCGGGATACCCTGGAGCGCATGGCGAA
GGTCGTCGACGAGCAGAACGCCGGAGATCCGGACTATACGGCGATGAGCGCCGACTTCTCGGCCTCCCATGCCTTCCAGG
CCGCCTCCGATCTGATCTTCAAGGGACTCGAGCAGCCCGCCGGTTACACCGAGCCGCTGCTGCACCACTGGCGCGCCGTT
CACAAGGGCGCCTGA

Protein sequence :
MTQRITRHRLQVAAELDRFINEQALPGTGVDPEAFWAGVDALFHDLTPQNRELLAERERLQAELDTWHRDNAGPVRDMAA
YRAFLEKIGYLVEAPANVEVTTTKVDREIAVQAGPQLVVPVNNARYALNAANARWGSLYDALYGTDAIADTEGAERGESF
NPKRAEKVIAYARGVLDRAAPLATGSHGEAVKYALRDGHLVVTLEGGRETGLKEPGKLVGFQGEAEAPDAVLLANHDLHL
EIQIDAGHPIGKTDPAGVKDVVVEAALTSIMDCEDSVAAVDAEDKVEVYANWLGLMKGDLETQIDKGGKTFTRRLNDDRT
WRNPAGGEVTLPGRSLLFVRNVGHLMTTPAVLDAEGNELPEGILDAVVTSLIALHDLAKGEGEPRNSREGSVYIVKPKMH
GPKEVAFADTLFERVEDLLGMTRDTLKMGIMDEERRTSVNLKACIAEATSRVVFINTGFLDRTGDEMHSTMEAGPMIRKG
DMKNSAWIGAYERSNVQTGLACGLRGHAQIGKGMWAMPDLMAAMLEQKIGHPKAGANTAWVPSPTAATLHALHYHQVSVA
EVQRELETQGEPDCLDELLTVPVAERPDWSDDEIQQELDNNCQGILGYVVRWVEHGVGCSKVPDIHDVGLMEDRATLRIS
SQHVANWLHHGVVDEARVRDTLERMAKVVDEQNAGDPDYTAMSADFSASHAFQAASDLIFKGLEQPAGYTEPLLHHWRAV
HKGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glcB CAE85241.1 GlcB protein, malate synthase G Not tested PAI V 536 Protein 0.0 63