Gene Information

Name : glcF (HELO_1585)
Accession : YP_003896654.1
Strain : Halomonas elongata DSM 2581
Genome accession: NC_014532
Putative virulence/resistance : Unknown
Product : glycolate oxidase iron-sulfur subunit
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG0247
EC number : -
Position : 672927 - 674159 bp
Length : 1233 bp
Strand : -
Note : glycolate oxidase iron-sulfur subunit - Escherichia coli (strain K12),InterPro: protein of unknown function DUF224, High confidence in function and specificity

DNA sequence :
ATGCAGACCCATTTCACCGAGCAAGACCTGGAGCAGCCGCATCTCCGCGAGGCGGAGCGGGTCCTGCGCACCTGCGTGCA
CTGCGGCTTCTGCAACGCTACTTGCCCCACCTACCAGTTGCTGGGCGACGAACGCGACGGCCCGCGCGGCCGCATCTACC
TGATGAAGACGCTGCTGGAGAGCCGCGACGACGACCATCAGGCCACCGAGGAGACGCGGCTGCACCTGGACCGCTGCCTC
AGTTGCCGCAACTGCGAGACCACCTGCCCTTCCGGCGTGGAATATCACAAGCTGCTCGACATCGGCCGCGCCGAGATCGA
GCGCCGCGTGCCACGCAAGGCCGGCGAACGTGCCCTGCGTTTCGGTCTGCGCAAGGCGCTGGTCGATCCCCGGCGCTTCC
GGGCCCTGCTCAAGCTCGGCCTGACCTTCAAGCCAGTGGTACCCGGTACGCTCAAGCAAAAGCTGCCCGCCACGCCGGTG
GACGCCGGCATCCGACCCGAGGGGCGGGACCACGAGCGCCAGATGCTGATCCTCGAAGGATGCGTCCAGCCCAGTCTGTC
GCCCAACACCAATGCCGCCACCGCGCGCGTGCTTGACCGGCTCGGCATCGGCCTGACGCCGGCCCCCGAGGCCGGCTGCT
GCGGCGCCGTCGACTTCCATCTCGACGCCCAGGACGCCGGCCGCGACCGGGCGCGGGCCAATATCGACGCCTGGTGGCCG
CATATCGAAGCCGGCTGCGAGGCCATCGTCCAGACCGCCAGCGGCTGTGGCGCCTTCGTCAAGGAATATGGCGAGATGCT
CGCCCATGATCCGGCCTACGCCGACAAGGCCGCCCGCGTCAGCGCCCTGGCCAGGGACCTGGTGGAAATCCTCGAGGACG
AGCCGCTCGACGGCCTGTCACTCGAGAACAACGGGCGGCTCGCCTTTCACTGCCCCTGCACCCTCCAGCATGCCCAACGG
CTCGGTGGCCATGTCGAGGGCCTGCTCGCCCGGCTCGGTTTTCAACTGACGCCGGTACGCGACGCCCACCTCTGCTGTGG
CTCGGCGGGCACCTACTCCATCACGCAACCGACGCTTGCCACCCAACTGCGCGACAACAAGCTCGACGCCCTGGAAGAAG
GCCGACCAGACGTCATCGCGACGGCCAATATCGGTTGCCAGAGCCACCTCGCCGGTGCCGACCGCACGCCGGTACGACAC
TGGATCGAACTCGTCGACGAAGCGTTGTCATGA

Protein sequence :
MQTHFTEQDLEQPHLREAERVLRTCVHCGFCNATCPTYQLLGDERDGPRGRIYLMKTLLESRDDDHQATEETRLHLDRCL
SCRNCETTCPSGVEYHKLLDIGRAEIERRVPRKAGERALRFGLRKALVDPRRFRALLKLGLTFKPVVPGTLKQKLPATPV
DAGIRPEGRDHERQMLILEGCVQPSLSPNTNAATARVLDRLGIGLTPAPEAGCCGAVDFHLDAQDAGRDRARANIDAWWP
HIEAGCEAIVQTASGCGAFVKEYGEMLAHDPAYADKAARVSALARDLVEILEDEPLDGLSLENNGRLAFHCPCTLQHAQR
LGGHVEGLLARLGFQLTPVRDAHLCCGSAGTYSITQPTLATQLRDNKLDALEEGRPDVIATANIGCQSHLAGADRTPVRH
WIELVDEALS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glcF CAE85243.1 GlcF protein Not tested PAI V 536 Protein 5e-126 65