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Name : glcD (HELO_1587) Accession : YP_003896656.1 Strain : Halomonas elongata DSM 2581 Genome accession: NC_014532 Putative virulence/resistance : Unknown Product : glycolate oxidase subunit GlcD Function : - COG functional category : C : Energy production and conversion COG ID : COG0277 EC number : 1.1.3.15 Position : 675265 - 676764 bp Length : 1500 bp Strand : - Note : glycolate oxidase subunit glcD - Escherichia coli O6,InterPro: glycolate oxidase subunit GlcD, High confidence in function and specificity DNA sequence : ATGAATCTCCTCTTCGACGAGCGACTCGACGGCGAGTTGCCCCGCCGCGACAAGGCGGAGGTGCTCGCCGAGCTGCAAAC CGCCCTGCCGGGCATGACCCTGCTGCACCGCGAGGAGGACCTGCGTCCCTTCGAGTGCGACGGTCTGGCCGCCTATCGCG TACTGCCCATGCTGGTGGCCTTGCCCAGTGATCTCGATCAGGTCGTCACCCTGATGCGCCGTTGCCATGAGCTCGGCGTC CCCGTGGTCACGCGCGGCGCCGGCACCGGACTGTCCGGCGGTGCCCTGCCGCTGGAGCGCGGCGTGCTGCTGGTGATGTC GCGCTTCCAGCGCATCCTGAGCATCGATCCGGAGGCGCGCATCGCCCGCGTCCAGCCCGGCGTTCGCAACCTGGCCATCT CCGAAGCGGCGGCCCCCCACGGGCTCTACTACGCACCCGACCCGTCGTCGCAGATCGCCTGCTCCATCGGCGGCAACGTG GCCGAGAATGCCGGCGGCGTGCACTGCCTGAAGTACGGCCTGACGGTGCACAACGTGCTCGCCCTGGAGATCGTCACCCT CGAGGGCGAACGGATGCGACTCGGCGGCGAGGCCCTGGATGCCCCGGGCTTCGATCTGCTCGCGCTGTTCAACGGCTCCG AAGGCATGCTCGGCGTGGTGACCGAGGTTACCGTCAAGCTGCTGCCCAAGCCCGAGACGGCCAAGGTGGTGATGGCCAGC TTCGACGACGTCGGCAAGGCCGGCAAGGCGGTGGGCGACATCATCGCCGCGGGCATCGTCCCCGGCGGCCTGGAGATGAT GGACAACCTGGCGATTCGCGCCGCCGAGGACTTCATCCACGCCGGCTACCCGGTGGAGGCGGAAGCGATCCTGCTCTGCG AGCTGGACGGCGTGGAGGCCGACGTGGACGACGACGTCGACACGGTACGCGGCGTGCTCGAAAGCGCCGGCGCCACCGAT ATCCGACTCGCCCGCGACGAGGCCGAGCGGGCGCGCTTCTGGTCCGGCCGCAAGAACGCCTTCCCGGCGGTGGGACGCAT CTCGCCGGACTACTACTGCATGGACGGCACCATCCCGCGCCGCGCCCTGCCCGAGGTCCTCGGCACCATTGCCGAACTCT CCGCCGAGTACGGCCTGAGGGTCGCCAACGTCTTCCATGCCGGCGACGGCAACATGCACCCGCTGATCCTGTTCGACGCC AACCGCGAAGGCGAGCTCGAACGTGCCGAGGCCCTGGGAGGCCGGATACTCGAAGCCTGCGTGGCGGCCGGCGGTTCGAT CACCGGTGAGCACGGCGTGGGGCGCGAGAAGATCAACCAGATGTGCGTCCAGTTCCCGACCGGCGAGCTGACCACCTTCC ACGCCGTGAAGGCAGCCTTCGATCCGGTGGGCCTGCTCAACCCGGGCAAGAACATTCCCACCCTGGCCCGTTGCGCCGAG TTCGGTGCCATGCACGTGCACCACGGCGAGCTGCCACACCCCGAGCTGCCCCGTTTCTGA Protein sequence : MNLLFDERLDGELPRRDKAEVLAELQTALPGMTLLHREEDLRPFECDGLAAYRVLPMLVALPSDLDQVVTLMRRCHELGV PVVTRGAGTGLSGGALPLERGVLLVMSRFQRILSIDPEARIARVQPGVRNLAISEAAAPHGLYYAPDPSSQIACSIGGNV AENAGGVHCLKYGLTVHNVLALEIVTLEGERMRLGGEALDAPGFDLLALFNGSEGMLGVVTEVTVKLLPKPETAKVVMAS FDDVGKAGKAVGDIIAAGIVPGGLEMMDNLAIRAAEDFIHAGYPVEAEAILLCELDGVEADVDDDVDTVRGVLESAGATD IRLARDEAERARFWSGRKNAFPAVGRISPDYYCMDGTIPRRALPEVLGTIAELSAEYGLRVANVFHAGDGNMHPLILFDA NREGELERAEALGGRILEACVAAGGSITGEHGVGREKINQMCVQFPTGELTTFHAVKAAFDPVGLLNPGKNIPTLARCAE FGAMHVHHGELPHPELPRF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcD | CAE85245.1 | GlcD protein | Not tested | PAI V 536 | Protein | 3e-177 | 76 |
