Gene Information

Name : BC1003_5741 (BC1003_5741)
Accession : YP_003910945.1
Strain :
Genome accession: NC_014540
Putative virulence/resistance : Virulence
Product : type VI secretion ATPase, ClpV1 family
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 2527016 - 2529691 bp
Length : 2676 bp
Strand : +
Note : TIGRFAM: type VI secretion ATPase, ClpV1 family; PFAM: ATPase AAA-2 domain protein; Clp domain protein; AAA ATPase central domain protein; Clp ATPase-like; KEGG: bpy:Bphyt_4919 type VI secretion ATPase, ClpV1 family; SMART: AAA ATPase

DNA sequence :
ATGAGTACGTCCCTCAACACCCTGATCGCCAAACTCAATCCGACCTGCCGGCAGGCAGCGTTGCAGGCGGCAAACAACTG
TCTCGCGCGCGGTCATTACGAGGTGGACCTCGAGCATCTGCTGCTGGCGTTGCTCGACGAACCGGCGAGCGATCTCGCGC
TCGTGCTGCGCGCAAGCAGCATCGACCTGCATGCGTTGCGTGCGGATATCGAGCGCGAATTGCAGCGCCTGAAAAGCGGT
AATACGCGCACGCCGGTGTTTTCCAGGCATCTGATCGATCTGCTCGAACAGGCGTGGTTGATTGCATCGCTCGATTCGCA
GATTGGACGCATTCGCTCGGGCCATTTGTTGCTGGCATTGCTGAGCGCGCCGGATCTCGCGCAGTTTGCCGAGCGCATGT
CGCCGCTCTGGCGCGACGTGCGCGTGACCGATCTCAAGCATAAGTTCGACGAACTGACGGCGGGCTCCTGCGAAGTCGAG
CGCAGTCAGGACGGGCAAGCCGCCACGGACCGTGCCGACGATCCGGCCACGTCCGCTTCCATGCCCGGCACGCCGTCCAG
AACACCCGCGCTCGATACGTACACCAGCAACCTCACGCAGCGCGCGCGCGAAGGCAAGATCGACCCCGTGATCGGCCGCG
AAGGCGAGATTCGCCAGACTATCGACATTCTGATGCGGCGCCGGCAGAACAATCCGATCATGACGGGCGAGGCGGGCGTC
GGCAAGACAGCGGTTGTCGAAGGTCTGGCGCTGCGCATCGCGGCCGACGACGTGCCCGCGCCGCTCAAGGGCGTGGCGCT
GCACGTGCTCGACATGGGGCTGTTGCAGGCAGGCGCGAGCGTGAAGGGCGAGTTCGAAAACCGCCTGAAAAGCGTGATCG
ATGAAGTGAAGAAGAGCCCGCATCCAATCATTCTGTTTATCGACGAAGCGCATACGATCATCGGCGCGGGCGGCCAGGCA
GGACAGAACGATGCGGCAAACCTGCTCAAGCCCGCACTGGCTCGCGGCGAACTGCGCACCATCGCAGCGACGACGTGGAG
CGAATACAAGAAGTACTTCGAGAAAGACGCGGCACTCGCACGGCGTTTCCAGGTCGTGAAGATCGAAGAGCCGAGCGAAA
CGCTTGCGGCGGCCATGTTGCGCGGCATGGCGTCGTTAATGGAAAAGCACTTCAACGTGCGTGTGCTCGACGACGCAATC
ACCGAGGCGGTGCGCCTGTCGCATCGCTACATTAGCGGGCGGCAGCTGCCGGATAAGGCGATCAGCGTGCTCGACACCGC
GTGCGCAAAAGTGGCGCTCGCGCATAGTTCGACACCGGCCGCTATCGACGATACGAAAAAGCGCCTCGAGCGCATCGACG
CGGAAATTGCCGCGCTCGAACGCGAGGCGGCGAGCGGGGCGCAGCACGACGAACGGCTCGCGCAACTGCGCGAACTCCGC
GAGGAAGACCTGCAACACCTCGCTGAAGATGAGGCGCGCTACGACAGGGAACGCGCGCTCGTGACGGAGATTGTCGACCT
GCGTGCTGAAATCGACGCGGCTCGCGTGAGCAGCGCCGACGCGCAGCAGGCGGAGAAAGCGCAGCAGGCGCGTGAAACGC
TCGCGCTGCGGGTGGCCGAATTGCAGGCTTTGCAGGGTACTCAACCGATGGTGCCGTTGCAGGTGGACGGACACGTCGTT
GCGGAAATCGTGGCGTCGTGGACCGGCATTCCGCTCGGCCGCATGGTCAAGGATGAAATCCAGACCGTGTTGAATCTGCA
GCCGTTGCTGGCCGCGCGCGTAATCGGCCAGGACCACGCGCTCGAAGCGATCGCGCAGCGCGTGCGCACGGCGAGCGCGA
ATCTCGAAGATCCAAACAAGCCGCGCGGCGTGTTCATGTTCGTCGGACCTTCGGGTGTCGGCAAGACCGAAACGGCATTG
GCACTTGCCGATGTGTTGTACGGCGGCGAGCGCAAGATGGTCACGATCAACATGAGCGAGTACCAGGAAGCGCACAGCGT
CTCGGGTCTGAAAGGCTCGCCGCCCGGCTACGTCGGTTATGGCGAGGGCGGGGTGTTGACCGAGGCGGTGCGCCGCAATC
CGTATTCGGTGGTGCTGCTCGACGAGGTGGAAAAGGCGCATCCCGATGTACTCGAAATGTTCTTCCAGGTGTTCGACAAA
GGCACGATGGACGACGCCGAAGGCCGCGAAATCGACTTCCGCAATACGCTGATCATTCTCACGTCGAATGTCGGTTCGCA
AGCGGTCATGCAGGCGTGCCTGAACAAAAGCGCAGAGGAACTGCCCGATGCGGACGCGCTCGCCGAAACCTTGCGTCCGC
AACTGTATAAGGCGTTCAAGCCGGCTTTTCTCGGCCGCATGAAAGTGGTGCCGTACTATCCGATTTCCGACGATGTGCTC
GCCGAGATTATCGAACTGAAACTGGAGAGAATTCGCCGCCGTATCGAGTCGAACCACAAGGCGGTATTTGAGTGGGACGA
GTCGCTGGTCGATGCGGTGCTTGCCCGCTGCACGGAAGTGGATTCGGGCGCGCGCAACGTGGACCACATTCTGAACGGTA
CGCTGCTGCCCGAAGTCGCGCAGCATGTGCTGGAGCGCATTGCGAACGGCGCGACGATCGAGCGCATTTCGGTGCGCTCG
AGCGAGGCCGGCGAATTCGAGTACGCCGTCGTATAA

Protein sequence :
MSTSLNTLIAKLNPTCRQAALQAANNCLARGHYEVDLEHLLLALLDEPASDLALVLRASSIDLHALRADIERELQRLKSG
NTRTPVFSRHLIDLLEQAWLIASLDSQIGRIRSGHLLLALLSAPDLAQFAERMSPLWRDVRVTDLKHKFDELTAGSCEVE
RSQDGQAATDRADDPATSASMPGTPSRTPALDTYTSNLTQRAREGKIDPVIGREGEIRQTIDILMRRRQNNPIMTGEAGV
GKTAVVEGLALRIAADDVPAPLKGVALHVLDMGLLQAGASVKGEFENRLKSVIDEVKKSPHPIILFIDEAHTIIGAGGQA
GQNDAANLLKPALARGELRTIAATTWSEYKKYFEKDAALARRFQVVKIEEPSETLAAAMLRGMASLMEKHFNVRVLDDAI
TEAVRLSHRYISGRQLPDKAISVLDTACAKVALAHSSTPAAIDDTKKRLERIDAEIAALEREAASGAQHDERLAQLRELR
EEDLQHLAEDEARYDRERALVTEIVDLRAEIDAARVSSADAQQAEKAQQARETLALRVAELQALQGTQPMVPLQVDGHVV
AEIVASWTGIPLGRMVKDEIQTVLNLQPLLAARVIGQDHALEAIAQRVRTASANLEDPNKPRGVFMFVGPSGVGKTETAL
ALADVLYGGERKMVTINMSEYQEAHSVSGLKGSPPGYVGYGEGGVLTEAVRRNPYSVVLLDEVEKAHPDVLEMFFQVFDK
GTMDDAEGREIDFRNTLIILTSNVGSQAVMQACLNKSAEELPDADALAETLRPQLYKAFKPAFLGRMKVVPYYPISDDVL
AEIIELKLERIRRRIESNHKAVFEWDESLVDAVLARCTEVDSGARNVDHILNGTLLPEVAQHVLERIANGATIERISVRS
SEAGEFEYAVV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 9e-147 49
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 3e-121 44
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 3e-121 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BC1003_5741 YP_003910945.1 type VI secretion ATPase, ClpV1 family VFG2076 Protein 0.0 52
BC1003_5741 YP_003910945.1 type VI secretion ATPase, ClpV1 family VFG2084 Protein 6e-142 45