Gene Information

Name : BC1003_4201 (BC1003_4201)
Accession : YP_003909428.1
Strain :
Genome accession: NC_014540
Putative virulence/resistance : Virulence
Product : type VI secretion protein, VC_A0107 family
Function : -
COG functional category : S : Function unknown
COG ID : COG3516
EC number : -
Position : 772415 - 772936 bp
Length : 522 bp
Strand : -
Note : KEGG: xcv:XCV4243 hypothetical protein; TIGRFAM: type VI secretion protein, VC_A0107 family; PFAM: Uncharacterised conserved protein UCP028301

DNA sequence : 
ATGGCAACGAGACAGAGCAGTCAAAAATTCATTGCGCGAAATCGTGCGCCGCGCGTACAGATCGAATATGACGTCGAGCT
GTACGGTGCGCAAAAGAAAGTGCAGATACCGTTTGTAATGGGCGTGATGTCGGATCTGTCCGGCGCAAACAGCGGCGATC
TTCCGCCAATAGAGGAGCGCAAGGCATTGGAGGTGGATGTCGATAACTTCGACAGCCGCATGCAATCGATGAAGCCGCGA
GTGAGCTTCAACGTTCCCAACACATTGACGGGCGAAGGCAATCTCGAAGTGGACATGACGTTCGAAAGCATGGACGACTT
TTCGCCCGCCGCGGTCGCGCGCAAGGTTGATGCGCTCGCCCGGCTGCTCCAGGCACGCACGCAACTGGCGAATCTCGGTA
CTTATCTCGACGGCAAGGCCGGCGCGGAGAAACTCATTGCCGAGGCGCTGAAGGACCCGGCGCTGCTGCAATCGCTAAGC
GCCGCGCCAAAGCCTGCTGACACCGAACCCGGACAGGAGTGA

Protein sequence : 
MATRQSSQKFIARNRAPRVQIEYDVELYGAQKKVQIPFVMGVMSDLSGANSGDLPPIEERKALEVDVDNFDSRMQSMKPR
VSFNVPNTLTGEGNLEVDMTFESMDDFSPAAVARKVDALARLLQARTQLANLGTYLDGKAGAEKLIAEALKDPALLQSLS
AAPKPADTEPGQE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0297 NP_454879.1 conserved hypothetical protein Not tested SPI-6 Protein 2e-50 65

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BC1003_4201 YP_003909428.1 type VI secretion protein, VC_A0107 family VFG2069 Protein 6e-53 73