Gene Information

Name : BC1003_4378 (BC1003_4378)
Accession : YP_003909603.1
Strain :
Genome accession: NC_014540
Putative virulence/resistance : Unknown
Product : transketolase central region
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG3958
EC number : -
Position : 978414 - 979415 bp
Length : 1002 bp
Strand : +
Note : PFAM: Transketolase central region; Transketolase domain-containing protein; KEGG: reu:Reut_B4778 transketolase subunit B

DNA sequence :
ATGAGCAACGCAACCCTCAGCAAACCGCGTCTGAAAACCTCGGCGATGATCGCGTCGATTGCGGGCGAAGGACAGCTCAC
GCGCCCGGCGCCGTTCGGTCACGCCCTCGTCGAACTGGCCCGGCAGAAAACCAATGTGGTCGGCATGACGGCCGACCTCG
GCAAGTACACGGACCTGCATATCTTCGCGAAGGAATTTCCCGAGCGCTACTATCAGATGGGCATGGCCGAGCAACTTTTG
ATGGGCGCGGCAGCCGGCCTCGCGCACGAAGGCGCGCAGCCGTTCGTGACGACCTACGCCGTGTTCGCCACGCGCCGCGC
CTATGATTTCATGCACCAGGCCATTGCCGAAGACAATCTGGACGTGAAGATTGTCTGCGCATTGCCCGGCTTGACGACCG
GTTACGGCCCGAGCCACCAGGCCGCGGAAGACCTTGCCCTGATGCGCGCGATGCCCAACATGACCGTCATCGATCCGTGC
GACGCGCTCGACATCGAGCAGATGGTGCCCGCGATTGCCGCGCACAGCGGCCCTGTCTATGCGCGCCTGCTGCGCGGCAA
CGTGCCGGCGGTGCTCGACGAATACGACTACACGTTCGAGCTCGGCAAGGCGAAGATGCTGCGCGACGGCGCCGAAGTGC
TCGTGATCTCGTCGGGCATCATGACGATGCGCGCTCTGGAAGTCGCGAAAGCGCTCGAGAGCGATCGGATTGGCGTGGGC
GTACTGCACGTGCCGACCATCAAGCCGCTCGATACGCAAACCATCGTGCGCGAGGCGAGGCGCTCAGGGCGGCTAGTCGT
GGTGGCGGAAAACCATACGACGATTGGCGGCCTCGGCGAAGCGATCGCCGCCGAACTGATGCGCGCCGGCGTGTCGTGCC
CGTTCCGCCAGGTCGCGCTGCCTGATGCGTTCCTCGCCGCGGGTGCTTTGCCGACATTGCACGACCGTTACGGCATTTCG
ACTTCTGCGATGTGCGCGGCGATCAAGGGCTGGCTCGCCTGA

Protein sequence :
MSNATLSKPRLKTSAMIASIAGEGQLTRPAPFGHALVELARQKTNVVGMTADLGKYTDLHIFAKEFPERYYQMGMAEQLL
MGAAAGLAHEGAQPFVTTYAVFATRRAYDFMHQAIAEDNLDVKIVCALPGLTTGYGPSHQAAEDLALMRAMPNMTVIDPC
DALDIEQMVPAIAAHSGPVYARLLRGNVPAVLDEYDYTFELGKAKMLRDGAEVLVISSGIMTMRALEVAKALESDRIGVG
VLHVPTIKPLDTQTIVREARRSGRLVVVAENHTTIGGLGEAIAAELMRAGVSCPFRQVALPDAFLAAGALPTLHDRYGIS
TSAMCAAIKGWLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96101.1 transketolase Not tested T-PAI Protein 7e-123 74
unnamed AAT96057.1 transketolase Not tested T-PAI Protein 2e-122 74
unnamed AAT96118.1 transketolase Not tested T-PAI Protein 1e-102 74
unnamed AAT96230.1 transketolase Not tested T-PAI Protein 1e-89 74