Gene Information

Name : Fbal_2129 (Fbal_2129)
Accession : YP_003913406.1
Strain : Ferrimonas balearica DSM 9799
Genome accession: NC_014541
Putative virulence/resistance : Unknown
Product : protein-export membrane protein SecD
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG0342
EC number : -
Position : 2377252 - 2379045 bp
Length : 1794 bp
Strand : +
Note : COGs: COG0342 Preprotein translocase subunit SecD; InterPro IPR003335: IPR005791; KEGG: ppr:PBPRB0500 preprotein translocase subunit SecD; PFAM: SecD/SecF/SecDF export membrane protein; SPTR: A3XSG2 Protein translocase subunit SecD; TIGRFAM: protein-expor

DNA sequence :
ATGAAGAAACCCACACGAGCCTCGGCGGTGATCAATCGATACCCCGCCTGGAAATACGTGGTGCTGGTGGTCACCCTGGT
GGTGATGACCCTCAGTGCCCTGCCCAGCTGGTACGGCGAAGACGCCGCCATTGATATCCACTGGTCCCACGCCAAAGACG
CGCAAAGCACCGAACGCTATCTGGAGTCACAGGGCATCTCCGTTAAGGCGATCAACCAGCAGGGTGAGCAGACCCAGATT
GTCCTGGCAGACCCTAACAGCCAATTTACCGCGCAGGCTGCGCTCACCAAGTGGATTGGCCCCGATGACAGCCTGGCACT
GTCCCAACAGCCCGCAGCCCCGAGCTGGCTGCTGAATATGGGCTTTGGCCCGATGAGCCTCGGCCTCGACCTGCGCGGTG
GCGTCCAGTTCCTGCTGGATGTGGACATGGCACCGGTGATGAACGCCCAGCAGCAAGCCGTGATGCAATCCCTGCGCAGC
ACCGTTCGCGGCGTGCGCGCCCAGGCCCAGCATGACCACAGTGTCACCACCAGTGCCCTGACTGACGCCCAACGTCAGCA
GGTGATCGAGGTGGTGAAGAAGGACTACCCGGGCTGGCAGTGGCGCAACCATGTTGACGGTCTTGCCCTCTCCATGAAAC
CGGAAGAGCAGGAGCAACTGACCCGCCTGACCGTGATCCAGAACCTGCAGATCCTGCGCAGCCGCATCGAGGAGCTGGGC
ATTACCGAGGCCGTGGTCCAGCGTCAGGGCACCAACCGCATCCGCATTGAGCTGCCCGGGGTGCAAGACCCGGTGGCGGC
CAAAAAAGTGATCGGCGCTACCACCAGCCTGGCCTTCTACGAGGTCAACCAGGGTGAGCCGGTTCAGGGTAAAACCCTGC
CCTTTAACCAGGGCGGCACCGTGTCCGTTAAGCGCCTGCCGGTGCTGACCGGGGAACACATCATCGACGCCCGGGCCGGG
CTCGACGAGATGTCTCAGCCCCAGGTCAATATCGTGCTGGACGCCGCCGGCGGCCGCATCATGTCCGACTTTACCCGCAA
TAAGATCGGCTACCCGATGGCCACCGCGTTCAGCGAGTATCGCCAGGACGCCGCCGGCCGCTCCGTGGTCGACACCGAGG
TGATCAGCGTGGCCACCATCCAGAGTCAGCTGGGCAGCCGCTTTGTGATCACCGGCAGCGGCTCCATGGCGGAAGCGCAA
CAGCTCGCCCTGCTGCTGCGTGCCGGCTCTCTGACCGCTCCGGTGGTGATCGTTGAGGAACGCACCATCGGCCCCACCCT
GGGGGCGGAAAACATCGAAAACGGCTTCCAGGCACTGGCCGTCGGCATGGGCGCCACCCTGCTGTTTATGGCCCTGTGGT
ATCGCCGACTGGGCTGGGTCGCCAACGTCGCACTGGTGGCCAACCTGGTCACTCTGTTTGGCTTGATGGCCCTGCTGCCC
GGTGCGGTGCTGACCCTGCCCGGCATCGCCGGTTTGGTGCTGACAGTCGGTATGGCGGTGGACACCAACGTGCTTATCTT
CGAGCGCATCCGTGACATGATCCGCCAGGGCCACAGTCTGGCCCGCGCCATCCATCTCGGCTTCGACCGCGCCCTGACCA
CCATCTGGGACGCCAACCTGACCACCATGATCACCGCCCTGGTGCTCTACTCCATCGGTAACGGTCCCATCCAGGGCTTT
GCCCTGACCCTGGGCCTCGGCCTGATGACCAGCCTGTTTACCGGGGTATTCCTGTCCCGCGCCCTGATCAACCTGGTGTG
GGGCCAAGACACTCGTCGCAAGGTGACCATATGA

Protein sequence :
MKKPTRASAVINRYPAWKYVVLVVTLVVMTLSALPSWYGEDAAIDIHWSHAKDAQSTERYLESQGISVKAINQQGEQTQI
VLADPNSQFTAQAALTKWIGPDDSLALSQQPAAPSWLLNMGFGPMSLGLDLRGGVQFLLDVDMAPVMNAQQQAVMQSLRS
TVRGVRAQAQHDHSVTTSALTDAQRQQVIEVVKKDYPGWQWRNHVDGLALSMKPEEQEQLTRLTVIQNLQILRSRIEELG
ITEAVVQRQGTNRIRIELPGVQDPVAAKKVIGATTSLAFYEVNQGEPVQGKTLPFNQGGTVSVKRLPVLTGEHIIDARAG
LDEMSQPQVNIVLDAAGGRIMSDFTRNKIGYPMATAFSEYRQDAAGRSVVDTEVISVATIQSQLGSRFVITGSGSMAEAQ
QLALLLRAGSLTAPVVIVEERTIGPTLGAENIENGFQALAVGMGATLLFMALWYRRLGWVANVALVANLVTLFGLMALLP
GAVLTLPGIAGLVLTVGMAVDTNVLIFERIRDMIRQGHSLARAIHLGFDRALTTIWDANLTTMITALVLYSIGNGPIQGF
ALTLGLGLMTSLFTGVFLSRALINLVWGQDTRRKVTI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
secD AAT96067.1 SecD Not tested T-PAI Protein 2e-85 41
secD AAT96119.1 SecD Not tested T-PAI Protein 2e-85 41
secD AAT96179.1 SecD Not tested T-PAI Protein 2e-85 41
secD AAT96103.1 SecD Not tested T-PAI Protein 1e-85 41
secD AAT96039.1 SecD Not tested T-PAI Protein 2e-85 41