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Name : Fbal_0251 (Fbal_0251) Accession : YP_003911539.1 Strain : Ferrimonas balearica DSM 9799 Genome accession: NC_014541 Putative virulence/resistance : Unknown Product : DNA-directed RNA polymerase subunit beta Function : - COG functional category : K : Transcription COG ID : COG0085 EC number : 2.7.7.6 Position : 278792 - 282817 bp Length : 4026 bp Strand : + Note : COGs: COG0085 DNA-directed RNA polymerase beta subunit/140 kD subunit; InterPro IPR007642: IPR007645: IPR007641: IPR007644: IPR 019462: IPR007120: IPR007121: IPR010243; KEGG: slo:Shew_0151 DNA-directed RNA polymerase subunit beta; PFAM: RNA polymerase Rpb DNA sequence : ATGGTTTACTCCGATTTCGAGAAAAAACGCATCCGCAAGGATTTTGGTAAGCGTCCCAAGGTACTGGACGTTCCTTACCT GCTTTCAATCCAGCTGGACTCGTTCCAAAACTTCCTCGAGCAAGATCCTGACGGCGAGCGCGGCCTGGAAGCGGCCTTCC GCAGCGTCTTCCCGATCAAAAGCTTCTCCGGTTACTCCGAACTGCAGTACGTCAGCTACAAGCTGGGCGAGCCGGTATTT GACGTTAAAGAGTGTCAAATCCGCGGTGTAACCTATTCCGCTCCCCTGCGTGTAAAACTGCGCCTTGTCCTGATGGACAA AGAGGCCGGTGGTGCCGTTAAGGACATCAAGGAGCAGGAAGTTTACATGGGCGATATCCCGCTCATGACCGAGAACGGTA CCTTTGTGATCAACGGTACCGAGCGTGTGATCGTATCCCAGCTGCACCGCAGCCCGGGTGTGTTCTTCGATCACGACAAA GGTAAGACCCACTCCTCCGGTAAGGTGCTCTACAACGCGCGGGTTATCCCGTACCGTGGCTCCTGGCTGGACTTCGAATT CGATCCGAAAGACAACCTGTTCGTTCGTATCGACCGTCGCCGCAAACTGCCGGCTTCCATCATCCTGCGCGCTCTGGGTT ACAGCACCCAGGAGATCCTGGATCTGTTCTTCGAGAAGGTTCAGTTCTCTCTGAAGAAAGACAAGCTGGTGATGGACCTG GTGCCGGACCGTCTGCGTGGTGAAACCGCGCTGTTCGACATCAAGGACAACAACGGCGATCTGATCGTGGAGAAGGGCCG TCGTGTGACTGCTCGCCACATCCGTCAGCTGGAAAAAGGCGACGTTAAACAGCTTGAAGTGGCCGTTGAGTACCTGGTTG GCAAAGTGGCCGCTCAGGACTACATCGACGACGCCACCGGTGAAGTTGTGGTTCACGCTAACCAGGAACTGTCCCTGGAA GACGTGGCCAAGCTGTCCCAAGCTGGCATCAAGTCTTTCGAGACTCTCTACACCAACGACCTGGATCATGGTCCGTACAT CTCCACCACCCTGCAGGTCGATAACACTTCCGACCGTATGGAAGCGCTGGTTGAGATCTACCGCATGATGCGCCCGGGCG AGCCGCCGACCCGCGAAGCCGCCGAAGCGCTGTTTGAGAACCTGTTCTTCTCTGAAGACCGCTACGACCTGTCCACCGTG GGCCGGATGAAGTTCAACCGTCGTCTGGGCCGTGATGAGTCCACCGGCGTTGGCATCCTGACCAAGGAAGACATCGTTGA CGTAATGCGTAAGATCATCGAGATCCGCAACGGCAACGACGAAGTGGACGACATCGACCACCTGGGTAACCGTCGTATCC GCTCCGTGGGCGAGATGGCAGAGAACCAGTTCCGCGTCGGTCTGGTACGTGTTGAGCGTGCCGTACGTGAGCGTCTGTCT CTGGGTGATCTGGATGCCCTGATGCCTCAGGACCTGATCAACGCCAAGCCGATCTCCGCAGCGGTGAAAGAGTTCTTTGG CTCTTCCCAGCTGTCTCAGTTTATGGATCAGAACAACCCGCTGTCCGAAGTGACTCACAAGCGCCGTATCTCCGCGCTGG GTCCGGGCGGTCTGACCCGTGAGCGTGCTGGCTTTGAGGTTCGAGACGTACACGTGACCCACTACGGTCGTCTGTGTCCG ATTGAGACCCCTGAAGGTCCGAACATTGGTCTGATCAACTCCCTGTCCACCTTTGCTCGTACCAACGAGTACGGCTTCCT GGAAACCCCGTTCCGTCGCGTAATCGACGGCAAGGTGACCGAAGAGGTGGAATATCTGTCTGCGATCGAAGAGGGTAACT TTGTTATCGCTCAGGCGAACGCACAGCTGGACGATGACGGCAACCTGACCGACGAACTGGTTGCGGCCCGTCAGAAAGGT GAATCCATCTTCGCCAGCGCTGACCAGGTAGACTTCATGGACGTTTCTCCGCAGCAGATCATCTCTGTGGCGGCGTCTCT GATCCCGTTCCTCGAGCACGACGATGCTAACCGCGCCTTGATGGGTGCGAACATGCAGCGTCAGGCCGTTCCGACCCTGA AGGCTGACAAGCCTCTGGTAGGTACCGGCATTGAGCGCGCTGTGGCCGTTGACTCCGGTGTAACCGTAGTGGCTAAGCGT GGCGGTGTGGTTGATTACGTGGATGCGTCCCGCATCGTGATCAAGGTGTCTGAAGATGAGCTGATGGCCGGTGAAGCCGG TATCGACATCTACAACCTGACCAAATACACCCGTTCTAACCAGAACACCTGCATCAACCAGCGTCCGGTATGTGCCGTTG GTGAGCCGGTAACCCGTGGTGACGTACTGGCCGATGGCCCGTCCACCGACCTGGGTGACCTGGCCCTGGGTCAGAACCTG CGCGTCGCGTTCATGACCTGGAACGGTTACAACTTTGAGGATTCCATCCTGCTGTCCGAGCGCGTGGTTCAGGAAGATCG CCTGACCACCATCCACATCCAGGAACTGTCCTGTATCGCTCGTGACACCAAGCTGGGTCCGGAAGAGATCACCGCAGACA TCCCGAACGTGGGCGAGTCCGCTCTGTCCAAGCTGGACGAGTCCGGTATCGTTTACGTGGGTGCCGAGATGAAGCCGGGC GACATCCTGGTGGGTAAGGTAACTCCGAAAGGCGAAACCCAGCTCACTCCGGAAGAGAAGCTGCTGCGCGCCATCTTTGG TGAGAAGGCGTCCGACGTTAAGGACTCCTCTCTGCGCGTTCCGAACGGCGTTTACGGCACCGTTATCGACGTACAGGTCT TTACCCGCGATGGCGTGGAGAAAGACAAGCGTGCTGTCGACATCGAGAACATGCAGCTGCGTGATGCCAAGAAGGACCTG ACTGAAGAGTTCAGCATCCTGGAAAACGGCATCTACAACCGTGCTCGCACCCTGCTTCTGGGCGCTGGCTTCAGCGAAGC TCAGCTGGACAAGCTGTCTCGTGACAAGTGGCTGGAACAGCCGCTGGACGACGAAGGCAAGCAGACCGAGCTGGAGCAGC TGGCTGACCAGTACGAAGAGCTGAAAGCCGAATTCGACAAGAAGTTCGAGATCAAGCGTCGCAAGATCACTCAAGGCGAT GACCTGGCCCCGGGCGTACTGAAGATCGTTAAGGTTTACCTGGCGGTTAAGCGTCGCATTCAGCCGGGCGATAAGATGGC CGGTCGTCACGGTAACAAAGGTGTAATTTCCACCATTGTTCCGGTTGAGGACATGCCGCACGACGAAAACGGCGTGCCGG TGGACATCGTTCTGAACCCGCTGGGTGTACCGTCCCGTATGAACATCGGTCAGATCCTGGAAGTTCACCTGGGTATGGCT GCTAAGGGCATCGGTGACAAGATCAACGGCATGCTGGAGCAGCAGCGCAAGGTTGAGGAACTGCGTGAGTTCATGCAGAA AGCCTACGACCTGGGCAACACCCAGCAGAAAGTGGATCTGGCGACCTTCTCTGACGCTGAAGTTCTGCGTCTGGCCGACA ACCTGAAAGGCGGTCTGCCGGTAGCCACCCCGGCGTTCGACGGTGCGGCTGAAGCAGAAATCAAAGAGATGCTGCGTCTG GCCGAGCTGCCGGATTCCGGTCAGTTCACCCTGTACGATGGCCGTACTGGTAACGCTTTCGAGCGTCCGGTAACCGTTGG CTACATGTACATGCTGAAACTGAACCACCTGGTTGACGACAAGATGCACGCCCGTTCCACCGGTTCTTACAGCCTGGTTA CCCAGCAGCCGCTGGGTGGTAAGGCTCAGTTCGGTGGTCAGCGTTTCGGTGAGATGGAAGTGTGGGCCCTGCAGGCCTAC GGTGCAGCCTACACCCTGCAGGAGATGCTCACCGTCAAGTCCGATGACGTCAACGGCCGTACCCAGATGTACAAGAACAT CGTGGACGGTAACTACCAGATGCAACCTGGCATGCCTGAATCCTTCAACGTGGTACTCAAAGAGATCCGTTCTCTGGGTA TCAACATCGAGTTGGATCAGGAATAA Protein sequence : MVYSDFEKKRIRKDFGKRPKVLDVPYLLSIQLDSFQNFLEQDPDGERGLEAAFRSVFPIKSFSGYSELQYVSYKLGEPVF DVKECQIRGVTYSAPLRVKLRLVLMDKEAGGAVKDIKEQEVYMGDIPLMTENGTFVINGTERVIVSQLHRSPGVFFDHDK GKTHSSGKVLYNARVIPYRGSWLDFEFDPKDNLFVRIDRRRKLPASIILRALGYSTQEILDLFFEKVQFSLKKDKLVMDL VPDRLRGETALFDIKDNNGDLIVEKGRRVTARHIRQLEKGDVKQLEVAVEYLVGKVAAQDYIDDATGEVVVHANQELSLE DVAKLSQAGIKSFETLYTNDLDHGPYISTTLQVDNTSDRMEALVEIYRMMRPGEPPTREAAEALFENLFFSEDRYDLSTV GRMKFNRRLGRDESTGVGILTKEDIVDVMRKIIEIRNGNDEVDDIDHLGNRRIRSVGEMAENQFRVGLVRVERAVRERLS LGDLDALMPQDLINAKPISAAVKEFFGSSQLSQFMDQNNPLSEVTHKRRISALGPGGLTRERAGFEVRDVHVTHYGRLCP IETPEGPNIGLINSLSTFARTNEYGFLETPFRRVIDGKVTEEVEYLSAIEEGNFVIAQANAQLDDDGNLTDELVAARQKG ESIFASADQVDFMDVSPQQIISVAASLIPFLEHDDANRALMGANMQRQAVPTLKADKPLVGTGIERAVAVDSGVTVVAKR GGVVDYVDASRIVIKVSEDELMAGEAGIDIYNLTKYTRSNQNTCINQRPVCAVGEPVTRGDVLADGPSTDLGDLALGQNL RVAFMTWNGYNFEDSILLSERVVQEDRLTTIHIQELSCIARDTKLGPEEITADIPNVGESALSKLDESGIVYVGAEMKPG DILVGKVTPKGETQLTPEEKLLRAIFGEKASDVKDSSLRVPNGVYGTVIDVQVFTRDGVEKDKRAVDIENMQLRDAKKDL TEEFSILENGIYNRARTLLLGAGFSEAQLDKLSRDKWLEQPLDDEGKQTELEQLADQYEELKAEFDKKFEIKRRKITQGD DLAPGVLKIVKVYLAVKRRIQPGDKMAGRHGNKGVISTIVPVEDMPHDENGVPVDIVLNPLGVPSRMNIGQILEVHLGMA AKGIGDKINGMLEQQRKVEELREFMQKAYDLGNTQQKVDLATFSDAEVLRLADNLKGGLPVATPAFDGAAEAEIKEMLRL AELPDSGQFTLYDGRTGNAFERPVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLGGKAQFGGQRFGEMEVWALQAY GAAYTLQEMLTVKSDDVNGRTQMYKNIVDGNYQMQPGMPESFNVVLKEIRSLGINIELDQE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00346 | YP_008207811.1 | DNA-directed RNA polymerase, beta subunit/140 kD subunit | Not tested | AbaR25 | Protein | 0.0 | 70 |
| BJAB0868_00350 | YP_008211676.1 | DNA-directed RNA polymerase, beta subunit/140 kD subunit | Not tested | AbaR26 | Protein | 0.0 | 70 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Fbal_0251 | YP_003911539.1 | DNA-directed RNA polymerase subunit beta | CP000034.1.gene3741. | Protein | 0.0 | 83 |
| Fbal_0251 | YP_003911539.1 | DNA-directed RNA polymerase subunit beta | NC_002695.1.914942.p | Protein | 0.0 | 83 |
| Fbal_0251 | YP_003911539.1 | DNA-directed RNA polymerase subunit beta | CP001138.1.gene4362. | Protein | 0.0 | 83 |
| Fbal_0251 | YP_003911539.1 | DNA-directed RNA polymerase subunit beta | CP000647.1.gene4402. | Protein | 0.0 | 83 |
| Fbal_0251 | YP_003911539.1 | DNA-directed RNA polymerase subunit beta | CP001918.1.gene250.p | Protein | 0.0 | 82 |
| Fbal_0251 | YP_003911539.1 | DNA-directed RNA polymerase subunit beta | CP004022.1.gene2794. | Protein | 0.0 | 82 |
| Fbal_0251 | YP_003911539.1 | DNA-directed RNA polymerase subunit beta | NC_002516.2.881699.p | Protein | 0.0 | 72 |
| Fbal_0251 | YP_003911539.1 | DNA-directed RNA polymerase subunit beta | NC_009085.4918494.p0 | Protein | 0.0 | 70 |
| Fbal_0251 | YP_003911539.1 | DNA-directed RNA polymerase subunit beta | NC_010611.6233925.p0 | Protein | 0.0 | 70 |
| Fbal_0251 | YP_003911539.1 | DNA-directed RNA polymerase subunit beta | NC_011595.7060572.p0 | Protein | 0.0 | 70 |
| Fbal_0251 | YP_003911539.1 | DNA-directed RNA polymerase subunit beta | NC_010410.6003841.p0 | Protein | 0.0 | 70 |
| Fbal_0251 | YP_003911539.1 | DNA-directed RNA polymerase subunit beta | NC_011586.7046027.p0 | Protein | 0.0 | 70 |
| Fbal_0251 | YP_003911539.1 | DNA-directed RNA polymerase subunit beta | NC_010400.5987325.p0 | Protein | 0.0 | 70 |
| Fbal_0251 | YP_003911539.1 | DNA-directed RNA polymerase subunit beta | CP000675.2.gene392.p | Protein | 0.0 | 69 |
| Fbal_0251 | YP_003911539.1 | DNA-directed RNA polymerase subunit beta | CP002695.1.gene18.p0 | Protein | 0.0 | 64 |
| Fbal_0251 | YP_003911539.1 | DNA-directed RNA polymerase subunit beta | NC_008702.1.4609796. | Protein | 0.0 | 64 |
| Fbal_0251 | YP_003911539.1 | DNA-directed RNA polymerase subunit beta | NC_011035.1.6448762. | Protein | 0.0 | 63 |
| Fbal_0251 | YP_003911539.1 | DNA-directed RNA polymerase subunit beta | NC_012469.1.7686402. | Protein | 0.0 | 46 |
