Gene Information

Name : LPST_C2345 (LPST_C2345)
Accession : YP_003925654.1
Strain : Lactobacillus plantarum ST-III
Genome accession: NC_014554
Putative virulence/resistance : Resistance
Product : ABC superfamily ATP binding cassette transporter, ABC protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2516143 - 2516844 bp
Length : 702 bp
Strand : -
Note : -

DNA sequence : 
ATGGCATACATCGAAGTGCAGCAGGCAACGCGCCAGTTTAAAAATGGTGAGCAGGTCACCGTTGCTAATCGTGATATTTC
ATTTGAAGTTGACCAGGGTGCGGTCGTTGTGATTTTAGGCCCGAGTGGTGCGGGAAAGTCCACGTTACTCAATATTTTAG
GTGGCATGGACAGTCCTACGAGCGGCCGTGTACTGGTGGATGGTGTGGACATTGCGCAATTCAACTCACGGCAATTAACA
ACCTATCGCCGGCAAGCGGTCGGGTTCGTTTTTCAATTCTACAACCTGGTTCCGAACTTGACGGCGCGTGAAAACGTCGA
GTTGGCGTCGCAAATTACCAAGGACGCACGCGACGTTGATGAGACGTTGACCTTGGTAGGACTGACGCACCGGTCAGATA
ACTTTCCAGCCCAGTTGTCCGGTGGTGAACAACAGCGGGTCGCAATTGCGCGGGCAGTTGCGAAGAATCCCAAATTATTA
CTCTGTGATGAACCCACTGGCGCGCTCGACTATCAGACGGGGAAGCAAGTCTTACAGGTGATTCAAGATGCAGCTAAGCA
GACGCAGACAACGGTCATCATTGTGACGCATAATAGTGCGATTGCGCAGCTGGGTGACCAAGTCATTCGTATCAATGATG
CTCAAGTGCAGTCGGTTGAGCATAATGCTCATCCAACGCCTTTGGCTGAGATTGAATGGTAG

Protein sequence : 
MAYIEVQQATRQFKNGEQVTVANRDISFEVDQGAVVVILGPSGAGKSTLLNILGGMDSPTSGRVLVDGVDIAQFNSRQLT
TYRRQAVGFVFQFYNLVPNLTARENVELASQITKDARDVDETLTLVGLTHRSDNFPAQLSGGEQQRVAIARAVAKNPKLL
LCDEPTGALDYQTGKQVLQVIQDAAKQTQTTVIIVTHNSAIAQLGDQVIRINDAQVQSVEHNAHPTPLAEIEW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-32 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LPST_C2345 YP_003925654.1 ABC superfamily ATP binding cassette transporter, ABC protein NC_012469.1.7685735. Protein 4e-70 63
LPST_C2345 YP_003925654.1 ABC superfamily ATP binding cassette transporter, ABC protein CP001581.1.gene798.p Protein 4e-42 43
LPST_C2345 YP_003925654.1 ABC superfamily ATP binding cassette transporter, ABC protein NC_012469.1.7686878. Protein 6e-37 43