|
Name : HPPC_01070 (HPPC_01070) Accession : YP_003926513.1 Strain : Helicobacter pylori PeCan4 Genome accession: NC_014555 Putative virulence/resistance : Unknown Product : sodium-dependent transporter Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG0471 EC number : - Position : 209603 - 211261 bp Length : 1659 bp Strand : + Note : COG0471 Di- and tricarboxylate transporters DNA sequence : ATGGAAAATCATTCGCATGCCAATACGCATACAGATACGCGCGCCGATGATAAAAGCACTAAAATCGTGCGCTTGTTGGG GTTAATAGGAGGAGCGTTAATCGCGCTTATTATCTATTATGCTTTAAACGCTCAACTGTCTCATATTGTAGAAGAAATCC CCAAGCTCAATTCTTTAAATTATAAGGCGATGCCTATTGTGGCTGGGGTGGCTGTTTTAATGGGGATATGGTGGATGACT GAAGCCATTGACCTGCCCGCAACCGCGCTTTTACCTTTGGTGCTTTTTAGCGTCTTTAGCGTGGATCAATTCGCTAGCGT TAGCTCTTCTTACGCATCGCCGATTATCTTTCTTTTTATGGGAGGGTTTATTTTAGCTTTAAGCATGCAAAAATGGAATT TGCACACACGCATCGCTCTAAGCATTATTTTATTAGTAGGCACAAGCCCTAGGAGGTTGATTTTAGGTTTCATGATAGCT ACAGGCTTTCTGTCTATGTGGGTGAGCAATACCGCAACGGCGGTGATGATGCTCCCTATTGGCATGAGCGTTTTGCAATT AGTCGCTAAACTTGTGGGCAAAGAAAACGCCTCTAATTCATGGCATCAAAAAGAAGAAATCACCAAAGCGCATGGGGGTA TTATGGGCAATATCGTGCATAAGGGTAAAGATATTACCCAAGTCATTCAAGAAAAGACCATCATTTATCGCACGAATTTC AGCATTTGCTTGATGCTTGGCATCGCTTATGCGGCTTCTATTGGCTCTTTAGGCACTCTTATTGGCACGCCGCCTAACGC TTTATTAGCCGGCTATATGAAAACCGCTTTCAATATTGAAATTGATTTTGCTCAGTGGATGGTGTTTGGAACACCGTTAG CCTTCATCATGCTCATTTTATCGTGGCTCTTGCTCACTTATGTGATTTTCCCTTTAAAGATTAAAGAAATCCCAGGGGGT AAGGAAGTCATTAGGGTAGAGTTAAAAAAATTAGGCCGCTTGAGCTGGGCGGAAATCTCTGTGGGCGTTATTTTTATTTT GGCGTCTTTAGGGTGGATTTTTTTAGATACGATTTTAAAATCTTGGGGCATTAAGATAGATAAAATTGATTCAGTGATTG CGATGGGGGTTTCTGCACTTTTATTCATTTTGCCCGCTAACCATCATGGCGATAGGCTCATTGATTGGGGTGTTGCTAAA AAACTCCCTTGGGATGTGTTGCTTTTATTTGGTGGCGGGTTAGCCTTGAGCGCGCAATTTTCTAAAACCGGGTTGAGTTT GTGGATCGGGCATTTAGTTTCTGGCTTTTCGCATTTACCGATTTTATTCATTATTGTCATGGTCACTTTAATGGTCATTT TCTTAACCGAAATCACTTCTAACACCGCCACTGCTGCGGCGTTTTTACCGGTGATTGGAGGGGTTGCGATGGGCATGGGT TATGAAAATCATCAAAGCTTGTTATTGACCATTCCTGTAGCCTTGAGCGCGACTTGCGCGTTCATGCTCCCTGTAGCCAC CCCACCCAATGCGATAGCTTATGGCTCTGGGTATGTTAAAATAACGGATATGATTAAAGCCGGTTTGTGGCTTAATTTAG TGGGCGTTGTTTTGATTAGCGCGTTTAGCTATTTTTTAGTTTCGCTGGTATTTAATTGA Protein sequence : MENHSHANTHTDTRADDKSTKIVRLLGLIGGALIALIIYYALNAQLSHIVEEIPKLNSLNYKAMPIVAGVAVLMGIWWMT EAIDLPATALLPLVLFSVFSVDQFASVSSSYASPIIFLFMGGFILALSMQKWNLHTRIALSIILLVGTSPRRLILGFMIA TGFLSMWVSNTATAVMMLPIGMSVLQLVAKLVGKENASNSWHQKEEITKAHGGIMGNIVHKGKDITQVIQEKTIIYRTNF SICLMLGIAYAASIGSLGTLIGTPPNALLAGYMKTAFNIEIDFAQWMVFGTPLAFIMLILSWLLLTYVIFPLKIKEIPGG KEVIRVELKKLGRLSWAEISVGVIFILASLGWIFLDTILKSWGIKIDKIDSVIAMGVSALLFILPANHHGDRLIDWGVAK KLPWDVLLLFGGGLALSAQFSKTGLSLWIGHLVSGFSHLPILFIIVMVTLMVIFLTEITSNTATAAAFLPVIGGVAMGMG YENHQSLLLTIPVALSATCAFMLPVATPPNAIAYGSGYVKITDMIKAGLWLNLVGVVLISAFSYFLVSLVFN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| DIP0179 | NP_938571.1 | hypothetical protein | Not tested | Not named | Protein | 1e-104 | 53 |
