Gene Information

Name : rnhA (HPPC_03480)
Accession : YP_003926976.1
Strain : Helicobacter pylori PeCan4
Genome accession: NC_014555
Putative virulence/resistance : Unknown
Product : ribonuclease H
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0328
EC number : 3.1.26.4
Position : 701220 - 701651 bp
Length : 432 bp
Strand : -
Note : COG0328 Ribonuclease HI

DNA sequence :
ATGCAAGAAATTGAAATTTTTTGCGATGGTTCTTCTTTAGGCAATCCTGGGCCAGGCGGTTATGCGGCGATTTTACGCTA
TAAAGATAAAGAAAAAACCATCAGTGGGGGCGAAAATTTCACCACGAATAACCGCATGGAATTAAGAGCGCTCAATGAAG
CCTTAAAAGTTTTGAAACGCCCATGCCATATCACGCTTTATAGCGATTCGCAATACGTGTGCCAAGCGATCAATGTGTGG
CTAGTTAACTGGCAAAAAAAGAATTTTGCTAAAGTTAAAAATGTGGATTTATGGAAAGAATTTTTAAAAGTCTCTAAAGG
GCATTTGATTGTGGCTGTTTGGATCAAGGGGCATAACGGGCATGCCGAGAACGAACGATGCGATAGCCTCGCTAAATTAG
AGGCGCAAAAACGGGTCAAAACGACCATTTAA

Protein sequence :
MQEIEIFCDGSSLGNPGPGGYAAILRYKDKEKTISGGENFTTNNRMELRALNEALKVLKRPCHITLYSDSQYVCQAINVW
LVNWQKKNFAKVKNVDLWKEFLKVSKGHLIVAVWIKGHNGHAENERCDSLAKLEAQKRVKTTI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rnhA AAO17224.1 RnhA Not tested tcd island Protein 9e-28 51