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Name : HPSJM_01175 (HPSJM_01175) Accession : YP_003928149.1 Strain : Helicobacter pylori SJM180 Genome accession: NC_014560 Putative virulence/resistance : Unknown Product : sodium-dependent transporter (huNaDC-1) Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG0471 EC number : - Position : 224360 - 226018 bp Length : 1659 bp Strand : + Note : COG0471 Di- and tricarboxylate transporters DNA sequence : ATGGAAAATCATTCGCATGCCAATACGCATACCGATACGCGCACCGATGATAAAAGCACTAAGATCGTGCGCTTGTTGGG TCTCATAGGGGGGGTGTTAATCGCACTCATTATCTATTACGCTTTAAACGCTCAAATGCCTCATATTGTAGAAGAAATCC CCAAGCTTAATTCCTTAAATTATAAGGCGATGCCTGTTGTGGCTGGGGTGGCTGTTTTAATGGGGATATGGTGGATGACT GAAGCCATTGACTTGCCTGCAACCGCGCTTTTACCTTTGGTGCTTTTTAGCGTCTTTAGCGTGGATCAATTCTCTAGTGT CAGCTCTTCTTACGCATCGCCCATTATCTTTCTTTTTATGGGAGGGTTTATTTTAGCTTTAAGCATGCAAAAATGGAACT TGCACACGCGCATCGCTTTAAGCATTATTTTACTAGTGGGCACAAGCCCTAGGAGGTTGATTTTAGGTTTCATGATAGCT ACAGGCTTTCTGTCTATGTGGGTGAGCAATACCGCAACGGCGGTGATGATGCTTCCTGTTGGCATGAGCGTTTTGCAATT AGTCGCTAAACTGGTGGGCAAAGAAAACGCCTCTCATTCATGGTATCAAAAAGAAGAAATCACCAAAGCGCATGGGGGTA TTATGAGTAATATCGTGCATAAGGGCAAAGACATTACCCAAGTCATTCAAGAAAAGACGACTATCTATCGCACGAATTTC AGTATTTGCTTGATGCTTGGTATCGCTTATGCGGCTTCTATTGGCTCTTTAGGCACTTTGATTGGCACGCCGCCTAACGC TTTATTGGCCGGCTATATGAAAACCGCTTTCAATATTGAAATTGGTTTCGCTCAGTGGATGGTGTTTGGGACGCCGTTAG CCTTTATCATGCTCATTTTAGCGTGGCTCTTGCTCACTTATGTGATTTTCCCTTTAAAGATTAAAGAAATCCCAGGGGGT AAGGAAGTCATTAGGGTGGAGTTAAAAAAATTAGGCCGTTTGAGTCAGGCGGAAATCTCGGTGGGGGTTATTTTTATTTT AGCGTCTTTAGGGTGGATTTTTTTAGGCGTAATGTTAAAATCTTGGGGCATTAAGATAGATAAAATTGATTCAGTGATCG CTATGGGGGTTTCTGCGCTTTTATTCATTTTGCCCGCTAACAATCAGGGCGATAGGCTCATTGATTGGGACACCACCAAA AAACTCCCTTGGGACGTGCTGCTTTTATTTGGCGGCGGGTTAGCTTTGAGCACGCAATTTTCTAAAACCGGGTTGAGTTT GTGGATTGGGCATTTAGTCTCTGGCTTTTCGCATTTACCGATTTTATTCATCATTGTCATGGTCACTTTAATGGTCATTT TCTTAACCGAAATCACTTCTAACACCGCCACTGCTGCGGCGTTTTTACCGGTGATTGGAGGGGTTGCGATGGGCATGGGT TATGAAAACCACCAGAGCTTGTTATTGACCATTCCTGTAGCCTTGAGCGCGACTTGCGCGTTCATGCTCCCTGTAGCCAC CCCACCCAATGCAATAGCTTATGGCTCTGGGTATGTTAAAATAACGGACATGATTAAAGCCGGTTTGTGGCTTAATTTAG TGGGCGTTGTTTTGATTAGCGCGTTTAGCTATTTTTTGGTTTCGTTAATATTTAATTGA Protein sequence : MENHSHANTHTDTRTDDKSTKIVRLLGLIGGVLIALIIYYALNAQMPHIVEEIPKLNSLNYKAMPVVAGVAVLMGIWWMT EAIDLPATALLPLVLFSVFSVDQFSSVSSSYASPIIFLFMGGFILALSMQKWNLHTRIALSIILLVGTSPRRLILGFMIA TGFLSMWVSNTATAVMMLPVGMSVLQLVAKLVGKENASHSWYQKEEITKAHGGIMSNIVHKGKDITQVIQEKTTIYRTNF SICLMLGIAYAASIGSLGTLIGTPPNALLAGYMKTAFNIEIGFAQWMVFGTPLAFIMLILAWLLLTYVIFPLKIKEIPGG KEVIRVELKKLGRLSQAEISVGVIFILASLGWIFLGVMLKSWGIKIDKIDSVIAMGVSALLFILPANNQGDRLIDWDTTK KLPWDVLLLFGGGLALSTQFSKTGLSLWIGHLVSGFSHLPILFIIVMVTLMVIFLTEITSNTATAAAFLPVIGGVAMGMG YENHQSLLLTIPVALSATCAFMLPVATPPNAIAYGSGYVKITDMIKAGLWLNLVGVVLISAFSYFLVSLIFN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| DIP0179 | NP_938571.1 | hypothetical protein | Not tested | Not named | Protein | 1e-102 | 52 |
