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Name : HPSJM_01210 (HPSJM_01210) Accession : YP_003928156.1 Strain : Helicobacter pylori SJM180 Genome accession: NC_014560 Putative virulence/resistance : Unknown Product : cysteine desulfurase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG1104 EC number : - Position : 230521 - 231684 bp Length : 1164 bp Strand : + Note : COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes DNA sequence : TTGTTACAACGAATTTATTTAGACAATAACGCTACAACTAGGATTGACCCTAAAGTCAAGGAGATCATGGATCCTTTTTT AAGGGATCATTATGGGAATCCTAGCTCGTTGCACCAGTTTGGCACAGAAACCCACCCAGCCATTGCAGAAGCGCTAGACA AGATTTATAAGGGCATTAACGCTAGGGATATAGATGATGTGATCATCACTTCTTGCGCGACAGAAAGCAATAATTGGGTT TTAAAGGGCGTGTATTTTGATGAATGCTTGAAAAAAGGCAAAAACCATATTGTAACCACGGTTGCAGAGCATCCGGCGGT GCGATCCACTTGCAATTTTTTAGAAAGCTTGGGGGTGGAGGTTACTTACTTGCCTATTAATGAGCATGGGAGTATCACCG CAGAGCAAGTCAAAGAAGCGATCACAGAAAAAACCGCTCTAGTGAGCGTGATGTGGGCGAATAATGAAACCGGTCTCATT TTCCCTATTGAAGAAATTGGGGCTATTTGTAAAGAAAAGGGCGTGTTGTTCCATACCGATGCCGTGCAAGCGATTGGTAA AATCCCTGTAGATGTGTTAAAAGCGAATGCGGATTTCCTTTCTTTTAGCGCGCACAAGTTTCATGGGCCTAAAGGCATTG GGGGGTTGTATATTAGAAGTGGGGTGGGATTGACCCCTCTTTTTCATGGCGGGGAGCATATGAATGGCAGGCGCAGCGGG ACTTTGAATGTGCCTTATATCGTGGGCATGGGCGAAGCGATGAAATTAGCCGTAGAGCATTTAGACTATGAAAAAGAAGT GGTAGGGAAATTGCGCGACAAATTAGAAGAAGCGCTTTTGAAAATCCCTGATGTGATGGTGGTGGGGGATCGAATCCATC GTGTGCCTAACACGACTTTAATCAGCGTGAGAGGGATTGAAGGAGAGGCCATGTTATGGGATTTGAATCGCTCCAATATC GCCGCTTCCACAGGGAGCGCGTGCGCGAGTGAGGATTTAGAGGCTAATCCGGTGATGGTAGCGATTGGAGCGAGTAAGGA ATTGGCTCATACCGCTATCAGGCTCTCATTGAGCCGTTTTAACACGGAAGCTGAAATTGATAAAACGATTGAAGTTTTCT CTCAAGCGGCTATAAGGTTGAGAAACATTTCAAGCTCTTATTAA Protein sequence : MLQRIYLDNNATTRIDPKVKEIMDPFLRDHYGNPSSLHQFGTETHPAIAEALDKIYKGINARDIDDVIITSCATESNNWV LKGVYFDECLKKGKNHIVTTVAEHPAVRSTCNFLESLGVEVTYLPINEHGSITAEQVKEAITEKTALVSVMWANNETGLI FPIEEIGAICKEKGVLFHTDAVQAIGKIPVDVLKANADFLSFSAHKFHGPKGIGGLYIRSGVGLTPLFHGGEHMNGRRSG TLNVPYIVGMGEAMKLAVEHLDYEKEVVGKLRDKLEEALLKIPDVMVVGDRIHRVPNTTLISVRGIEGEAMLWDLNRSNI AASTGSACASEDLEANPVMVAIGASKELAHTAIRLSLSRFNTEAEIDKTIEVFSQAAIRLRNISSSY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAT96060.1 | cysteine desulfurase | Not tested | T-PAI | Protein | 4e-49 | 41 |
