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Name : tgt (HPSJM_01520) Accession : YP_003928217.1 Strain : Helicobacter pylori SJM180 Genome accession: NC_014560 Putative virulence/resistance : Unknown Product : queuine tRNA-ribosyltransferase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0343 EC number : 2.4.2.29 Position : 289594 - 290709 bp Length : 1116 bp Strand : - Note : COG0343 Queuine/archaeosine tRNA-ribosyltransferase DNA sequence : ATGGATTTTCAACTCCAAGCTATTGATGATAACGCGCGAGCTGGTCTTTTAAATTTAGCCCATTCTCAAGTGGCAACGCC TGTTTTTATGCCAGTAGGCACGCAAGGCTGCATCAAATCTTTAGACGCTATGGATATGCAAGAAATTTTAGGCGCTAAAC TCATTTTAGCCAACACCTATCACATGTATTTAAGACCGGGCGAGAAAGCGGTTGAACAATTAGGGGGTTTGCATCGTTTC GCTCAATTTCATGGGAGTTTTTTAACCGATAGCGGAGGGTTTCAAGCCTTCAGCTTGAGCGATAATGTCAAATTGCAAGA AGACGGGATCGTTTTTAAATCCCATATTGATGGGAGCAAGCATCTATTCACGCCCGCTAAAGTTTTAGACATTCAATATT CTTTGAATAGCGATATTATGATGGTTTTAGACGATTTAGTGGGCTTGCCCGCTCCACTAAAACGCCTTGAAGAATCTATT AAAAGAAGCGCTAAATGGGCGAATCTCAGCCTAGAATACCACAAAGAAAAAAACCGCCCTAACAACAACCTTTTTGCCAT TATCCAGGGCGGCACGCATTTGAAAATGCGAAGCCTTAGCGTGGAATTAACGCACGGGGGTTTTGATGGTTATGCTATAG GCGGTTTAGCGGTGGGGGAAAGTGTAGATGAAATGCTAGAAACGATCGCACACACCGCCCCCTTGCTCCCTAAAGACAAG CCTCGCTACCTAATGGGCGTAGGCACGCCTGAAAACATTTTAGACACTATCAGTTTAGGGGTGGACATGTTTGATTGCGT GATGCCCACCAGAAACGCCAGAAACGCCACCCTTTTCACGCATTCTGGCAAGATTTCTATCAAAAACGCGCCCTATAAAT TGGATGATACCCCTATTGAAGAAAATTGCACCTGTTATGCTTGCAAACGCTATTCTAAAGCCTATTTGCACCATCTCTTT AGGGCTAAAGAACTCACTTACGCTCGTTTGGCCAGCTTGCACAATCTGCATTTTTATTTAGAGCTGGTTAAAAACGCCAG AAACGCCATTTTAGAAAAGCGGTTTTTGAGTTTTAAAAAAGAATTTTTAGAAAAATACCACTCTTGTTCGCATTGA Protein sequence : MDFQLQAIDDNARAGLLNLAHSQVATPVFMPVGTQGCIKSLDAMDMQEILGAKLILANTYHMYLRPGEKAVEQLGGLHRF AQFHGSFLTDSGGFQAFSLSDNVKLQEDGIVFKSHIDGSKHLFTPAKVLDIQYSLNSDIMMVLDDLVGLPAPLKRLEESI KRSAKWANLSLEYHKEKNRPNNNLFAIIQGGTHLKMRSLSVELTHGGFDGYAIGGLAVGESVDEMLETIAHTAPLLPKDK PRYLMGVGTPENILDTISLGVDMFDCVMPTRNARNATLFTHSGKISIKNAPYKLDDTPIEENCTCYACKRYSKAYLHHLF RAKELTYARLASLHNLHFYLELVKNARNAILEKRFLSFKKEFLEKYHSCSH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tgt | AAT96069.1 | Tgt | Not tested | T-PAI | Protein | 1e-73 | 45 |
| tgt | AAT96181.1 | Tgt | Not tested | T-PAI | Protein | 1e-73 | 45 |
| tgt | AAT96041.1 | Tgt | Not tested | T-PAI | Protein | 1e-73 | 45 |
| tgt | AAT96105.1 | Tgt | Not tested | T-PAI | Protein | 1e-73 | 45 |
| tgt | AAT96121.1 | Tgt | Not tested | T-PAI | Protein | 1e-73 | 45 |
