|
Name : ccmF (Pvag_2156) Accession : YP_003931785.1 Strain : Pantoea vagans C9-1 Genome accession: NC_014562 Putative virulence/resistance : Unknown Product : cytochrome c-type biogenesis protein ccmF Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1138 EC number : - Position : 2298169 - 2300127 bp Length : 1959 bp Strand : - Note : cytochrome c biogenesis factor DNA sequence : ATGATGCCCGAAATCGGTACCTTTCTGCTCTGCCTGGCGCTAGGGCTTTCCCTGTTGCTGAGCAGTTATCCGCTGTGGGG CGCAGTACGTCAGGATGCCCGTCTGATGGCGATGGCGCGTCCGCTGGCCTGCGGCTTATTTATCTGCATCGCGGCGGCGT TTGCGCTGCTGGTCTGGGCTTTTATCAGCAACGACTTTACCGTTGCCTATGTCGTCACGAACTCCAACAGTCTGCTGCCG GTCTACTATCGCATCGCTGCCACCTGGGGCGCACACGAAGGTTCACTGCTGCTGTGGGTGCTGCTGCTCAGCACATGGAC ACTGGCGGTAGCGATCTTCAGCCGCGGGATGCCGCAGGATGCGCTGGCCCGCGTGCTGGCCGTCATGGGAATGATCAACC TCGGCTTCCTGCTGTTTATCCTGCTGACCTCCAATCCGTTTGGCCGCACGCTGCCGGACTTCCCGATAGACGGGCACGAC CTGAATCCGATGCTGCAGGATATCGGCCTGATTTTCCATCCGCCGCTGCTCTATATGGGCTATGTCGGCTTTTCGGTGGC GTTTGCCTTCGCCATCGCCTCATTAATGGCCGGACGGCTCGATACCGCCTGGGCGCGCTGGTCGCGTCCCTGGACGACGG CGGCCTGGGTCTTTCTGACCATCGGGATTGTCCTTGGATCTGCCTGGGCCTATTACGAACTGGGCTGGGGCGGCTGGTGG TTCTGGGACCCGGTTGAAAATGCGTCGTTTATGCCATGGCTGGCGGGCACCGCCCTGATGCACTCGCTGGCGGTCACCGA AAAGCGCGGCACCTTTAAGGCCTGGACCGTGCTGCTGGCGATTACGGCATTTTCGCTGAGCCTGCTCGGGACATTCCTGG TGCGATCCGGCGTGCTGGTGTCGGTGCACTCCTTTGCCTCCGATCCGGCGCGCGGCATGTTTATCCTCGCATTTCTGGTG ATTGTCATCGGCAGTTCACTGCTGCTCTACGCCATTAAAGGCGGGCAGGTGCGTGGCCGGGTTCAGAATGAAACCTGGTC GCGGGAATCGTTCCTGCTGGGTAATAACGTGCTGCTGATTGCCGCAATGCTGGTGGTGCTGCTCGGCACGCTATTGCCGC TGGTACACAAGCAACTGGGGCTGGGCAGCATTTCGGTCGGTGAACCCTTCTTCAACACGATGTTCAGCTGGCTGATGGCA CCGTTTGCGTTGCTGATGGGGATCGGGCCGCTGGTGCGCTGGCGTCGCGATGAACCGCAGAAGCTGGCTAAACGGCTGGC GCTGGCGCTGATGGTGACACTGGCCTGTTCCATGATCATTCCGTGGTGGCTGCAGGATCGTATTGAAGCGATGACGGTGG TTGGTCTGCTGATGTCACTCTGGATTATCGTGCTGACGCTGCTGGAACTGCATGAGCGCGCCACCCATCGTCATCCGTTC TTTGCGGGTTTACGTCATCTGTCGCGCAGTCACTGGGGCATGGTGCTGGGCCATCTGGGGGTCGGTGTCACGGTGATTGG CATTGCGTTCAGCACGCAGTACAGCGTCGAACGCGATGTGCGGATGAAGGCGGGCGATAGCGTCGATATTCATCATTATC ACTTTGTCTTCCGTGGCGTGCAGAATCTGCAGGGGCCAAACTACAGCGGCGGCATGGGTATCATTGATGTTACGCGCAAT GGCAGACATGAAGCGACGCTGCAGGCGGAAAAACGTTTTTATACCGCCGCCCGCACCATGATGACCGAAGCGGCGATCGA TGGCGGTTTCAGCCGCGATCTCTACGCGGCGCTGGGCGAAGAGCTGGAGGATGGCGGCTGGGCTGTGCGCATCTACTACA AACCCTTTGTCCGCTGGATCTGGTTCGGTGGCGCGCTAATGGCGGTGGGCGGGCTGTTCTGCCTGTTTGATCCCCGTTAC CGTTCGCGCAAAAAAGCAGAAACGGAGGTGCGGACATGA Protein sequence : MMPEIGTFLLCLALGLSLLLSSYPLWGAVRQDARLMAMARPLACGLFICIAAAFALLVWAFISNDFTVAYVVTNSNSLLP VYYRIAATWGAHEGSLLLWVLLLSTWTLAVAIFSRGMPQDALARVLAVMGMINLGFLLFILLTSNPFGRTLPDFPIDGHD LNPMLQDIGLIFHPPLLYMGYVGFSVAFAFAIASLMAGRLDTAWARWSRPWTTAAWVFLTIGIVLGSAWAYYELGWGGWW FWDPVENASFMPWLAGTALMHSLAVTEKRGTFKAWTVLLAITAFSLSLLGTFLVRSGVLVSVHSFASDPARGMFILAFLV IVIGSSLLLYAIKGGQVRGRVQNETWSRESFLLGNNVLLIAAMLVVLLGTLLPLVHKQLGLGSISVGEPFFNTMFSWLMA PFALLMGIGPLVRWRRDEPQKLAKRLALALMVTLACSMIIPWWLQDRIEAMTVVGLLMSLWIIVLTLLELHERATHRHPF FAGLRHLSRSHWGMVLGHLGVGVTVIGIAFSTQYSVERDVRMKAGDSVDIHHYHFVFRGVQNLQGPNYSGGMGIIDVTRN GRHEATLQAEKRFYTAARTMMTEAAIDGGFSRDLYAALGEELEDGGWAVRIYYKPFVRWIWFGGALMAVGGLFCLFDPRY RSRKKAETEVRT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 2e-171 | 72 |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 2e-125 | 53 |
