Gene Information

Name : ccmC (Pvag_2159)
Accession : YP_003931788.1
Strain : Pantoea vagans C9-1
Genome accession: NC_014562
Putative virulence/resistance : Virulence
Product : heme exporter protein C
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0755
EC number : -
Position : 2300836 - 2301576 bp
Length : 741 bp
Strand : -
Note : cytochrome c biogenesis factor

DNA sequence :
ATGTGGAAAGCGTTACATCAGCTGGCCAGGCCCGAACGGCTTTATCAATTTTCGGGGCGACTGGTGCCCTGGTTTGCCGT
TGCAGGGCTGGCATCATTGCTGCTGGGCTGGGTCTGGGGATTCGGATTTGCCCCTGCTGATTATCAGCAGGGCGACAGTT
TTCGCATCATGTATATCCATGTACCCGCCGCGATGTGGTCGATGGGCATCTATGCCTCCATGGCTATCGCCGCTTTTACT
GGTCTGGTGTGGCAGATGAAGATGGCCGATCTGGTTTCCGCTGCGATGGCTCCGGTGGGCGCGGTTTTTACCTTTATTGC
GCTGGTCACCGGTTCCGCATGGGGCAAGCCGATGTGGGGCACCTGGTGGATCTGGGATGCGCGTCTGACATCGGAACTGG
TGCTGCTGTTCCTCTATATGGGCGTGATCGCGCTTTATCACGCTTTTGATGACCGCCGCACCGCAGGCCGGGCCGCCGGT
ATTCTGATTCTGGTTGGTGTGGTCAATCTGCCCATCATTCACTTCTCGGTGCAGTGGTGGAATACCCTCCATCAGGGTTC
GTCAGGCATTCTTCAGCAGGCGATTGCGCCGGTCATGCGCACGCCGCTACGCTGGTCGATCCTCGGTTATCTGCTGCTGT
TTATTACGCTGACCCTGATGCGGCTGCGCAACCTGATCCTGTTAACTGAACGTCATCGTCCCTGGGCGATAGATGTGGCG
AAGCAGGGAGAGCAGGCATGA

Protein sequence :
MWKALHQLARPERLYQFSGRLVPWFAVAGLASLLLGWVWGFGFAPADYQQGDSFRIMYIHVPAAMWSMGIYASMAIAAFT
GLVWQMKMADLVSAAMAPVGAVFTFIALVTGSAWGKPMWGTWWIWDARLTSELVLLFLYMGVIALYHAFDDRRTAGRAAG
ILILVGVVNLPIIHFSVQWWNTLHQGSSGILQQAIAPVMRTPLRWSILGYLLLFITLTLMRLRNLILLTERHRPWAIDVA
KQGEQA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ccmC AAN62109.1 putative heme exporter protein C Not tested PAGI-2(C) Protein 2e-42 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ccmC YP_003931788.1 heme exporter protein C VFG1856 Protein 1e-46 55