Gene Information

Name : emrR (Pvag_2362)
Accession : YP_003931984.1
Strain : Pantoea vagans C9-1
Genome accession: NC_014562
Putative virulence/resistance : Resistance
Product : transcriptional repressor of emrAB operon
Function : -
COG functional category : K : Transcription
COG ID : COG1846
EC number : -
Position : 2514059 - 2514589 bp
Length : 531 bp
Strand : +
Note : transcriptional regulators

DNA sequence : 
ATGGAAAGTTCGTTTACTCCCATTGAGCAGATGCTAAACATCCGTGCCAATCGCCATAAGGATTTTCCGTTGCAGGAAAT
TATTCTGACGCGTCTCTGTATGCATATGCAGGGTAAACTGCTGGACAACCGCAATAAGATGCTGAAAGCACAGGGTATTA
ATGAGACCCTGTTTATGGCGTTGATTACACTGGATGCGCAGGAAAATCACAGCATTCAGCCTTCTGAGCTCAGCTCTGCC
CTTGGCTCTTCACGCACCAATGCCACGCGCATTGCTGATGAGCTGGAAAAGCGCGGCTGGATTGAGCGTCGCGAAAGCGA
TCACGATCGTCGTTGTCTGCACCTGCATCTGACCGATAAAGGGATGGAGTTCCTGCGTCAGTTGCTGCCACCTCAGCATC
AGAGCCTGCAGTACCTCTGGTCGTCGCTGTCAGTCGATGAGAAGTCTCAGCTCGAAGGCATTACCCGTAAGTTGCTTAAT
CGTCTTGATAAAATGGATGAAGATCAGCTGATCGCCTCGCTGTCCCGCTAA

Protein sequence : 
MESSFTPIEQMLNIRANRHKDFPLQEIILTRLCMHMQGKLLDNRNKMLKAQGINETLFMALITLDAQENHSIQPSELSSA
LGSSRTNATRIADELEKRGWIERRESDHDRRCLHLHLTDKGMEFLRQLLPPQHQSLQYLWSSLSVDEKSQLEGITRKLLN
RLDKMDEDQLIASLSR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fooX AAT48696.1 putative regulatory protein Not tested PAI I 4787 Protein 2e-22 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
emrR YP_003931984.1 transcriptional repressor of emrAB operon CP000647.1.gene3013. Protein 2e-51 81
emrR YP_003931984.1 transcriptional repressor of emrAB operon BAC0559 Protein 3e-65 81
emrR YP_003931984.1 transcriptional repressor of emrAB operon CP000034.1.gene2879. Protein 5e-65 80
emrR YP_003931984.1 transcriptional repressor of emrAB operon CP004022.1.gene551.p Protein 3e-52 69