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Name : dniR (Pvag_0239) Accession : YP_003929903.1 Strain : Pantoea vagans C9-1 Genome accession: NC_014562 Putative virulence/resistance : Unknown Product : membrane-bound lytic murein transglycosylase D Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0741 EC number : 3.2.1.- Position : 266961 - 268337 bp Length : 1377 bp Strand : - Note : Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) DNA sequence : ATGAAGGCTAAAGCGATCTTACTCGCCTCAGTCTTGCTGGTAGGATGTCAGGCGTCCAGGAACGATGCCAATATCCCCGA ACAGCATGCACAGAGTCTGTCTTCAGCTGGTCAAGGTGAAAATGGAAAGTACGGAGACGAGTTTTTGTCGCCGCGATGGC AGGAAGATGGAACTGGCCTCGCAGCAGACGCAGATCTCTGGAGTTTCATTAGTGACGAGTTGAAGATGGGGATTCCGGAA AACCCGGCAATCCGCGAACAAAAAAGTAAATTTTTAAAAAATAAGAGCTATCTCCACGATGTAACATTACGGGCAGAGCC GTACATGTACTGGATAGTCGAGCAGATACAGAAACGTAAAATGCCGATGGAACTGGTACTGCTACCCATAGTGGAGAGCG CTTTTGACCCTCGCGCAACCTCATCCGCCAATGCCGCTGGTATCTGGCAGATTGTTGCAGCTACGGGTCGAAACTATGGT TTGAAACAAAACCAGTATTACGATGGGCGACGTGATGTAGTCGCATCCACGAAAGTTGCGCTGGATATGATGCAGCGTCT TAACACCATGTTTGACGGTGACTGGTTACTGACCATCGCTGCTTACAACAGTGGTGAAGGACGGGTGCTCAAAGCGATCA AGCAGAATAAGGCGCGCGGTAAGCCGACTGACTTCTGGCATTTATCGCTGCCACGCGAAACGACCGTGTATGTGCCTAAA ATGTTAGCTCTGAGTGAACTGCTCAAAAATAACAAGCGTTACGGTATCAAACTGCCGACACCTAATGAAAGTCGTGCTCT GGCACGAGTGGAAGTGGGTCAGCAGATACAGCTGACGCAGGCTGCTGAAATGGCAGGTATGTCGCTCACGAAACTTAAGA GCTTCAATACCGGCTACAAAGGCGGTGCAACAGCGCCAAACGGCCCGCACTATATTATGGTGCCGAAGTCGAACGTCGCG AAATTGCGAAACTCACTGGCTTCCGGTGACATCGCAGCGGTACAGCCTGTGCAGCTTGCGAAAGCCAGCGCGAGTGGCGG GTACAAAGTGCGACGGGGTGATACGCTTTCTGGTATCGCCGCTAAACTTGGCGTTAGCGTCTCGACACTGAAGCAGGAAA ACAACCTGCGCGGTGCTGATATCCGACCGGGTCAGACGCTGACCATCGGTTCGAACGGCACCCGACTGGCTGATAACGGC AACAGCATCACCTATCGTGTTCGTAAGGGTGATTCTCTTGACAGTATTGCCCGTCATCACGGCGTCAATATCAAAGACGT GATGCGCTGGAACAGTGTGCTGGACAGTGCGAAAGATATTCAACCCGGCGATAACTTAACGCTGTTTGTGAATAATAACG CAACACCGGATACCTGA Protein sequence : MKAKAILLASVLLVGCQASRNDANIPEQHAQSLSSAGQGENGKYGDEFLSPRWQEDGTGLAADADLWSFISDELKMGIPE NPAIREQKSKFLKNKSYLHDVTLRAEPYMYWIVEQIQKRKMPMELVLLPIVESAFDPRATSSANAAGIWQIVAATGRNYG LKQNQYYDGRRDVVASTKVALDMMQRLNTMFDGDWLLTIAAYNSGEGRVLKAIKQNKARGKPTDFWHLSLPRETTVYVPK MLALSELLKNNKRYGIKLPTPNESRALARVEVGQQIQLTQAAEMAGMSLTKLKSFNTGYKGGATAPNGPHYIMVPKSNVA KLRNSLASGDIAAVQPVQLAKASASGGYKVRRGDTLSGIAAKLGVSVSTLKQENNLRGADIRPGQTLTIGSNGTRLADNG NSITYRVRKGDSLDSIARHHGVNIKDVMRWNSVLDSAKDIQPGDNLTLFVNNNATPDT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| mltD | AAO17227.1 | MltD | Not tested | tcd island | Protein | 5e-127 | 58 |
