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Name : secD (Pvag_0348) Accession : YP_003930010.1 Strain : Pantoea vagans C9-1 Genome accession: NC_014562 Putative virulence/resistance : Unknown Product : protein-export membrane protein secD Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0342 EC number : - Position : 380584 - 382431 bp Length : 1848 bp Strand : + Note : preprotein translocase subunit SecD DNA sequence : GTGTTAAATCGTTATCCTTTGTGGAAGTACGTAATGCTGGTCGTCGTGATTCTCGTCGGCCTGCTCTATGCGCTTCCCAA CCTGTATGGTGAGGATCCGGCCGTTCAAATCACTGGTGCGCGCGGAAGCGCCGCCAGTGAGCAGACGTTGGATCAAATTC AGTCCGCATTAAAACAAGACAATATCCAGAGCAAATCTGTTGCGCTGGAAAATGGTGCGATTACCGCGCGTTTCGCTAAT ACGGATGTGCAGTTACGCGCCCGTGAAGCGATCATGAAAGCGCTGGGTGAAAACTACGTTGTCGCGCTGAACCTTGCGCC CGCCACGCCGCGCTGGCTGACGATGCTGTCAGCAGAGCCGATGAAACTCGGTCTCGATCTGCGTGGTGGTGTGCACTTCC TGATGGAAGTGGACATGGACACCGCGCTCAGCAAGCTGCAGGAGCAGAATGCTGACACGCTGCGTAGCGACCTGCGCACC AAAAATATCCCCTACACCAACGTTAATAAAATCGCGAACTACGGCGTGGAAATTCGTTTCCGTGACGCTGCCAGCCGCGA CGCGGCGATCTCCTGGCTGAGCTCGCGTCATCAGGATCTGGTGATCAACAGCAGCGGCAGCGATGCACTGCGTGCCACCA TGAGCGATGCCCGTCTCAGCGAAGCGCGTGAATATGCGGTTCAGCAGAACATTACGATTCTGCGTAACCGTGTAAACCAG CTGGGCGTAGCTGAACCGCTGGTTCAGCGTCAGGGTTCCGATCGTATCGTGGTTGAGCTGCCGGGTATTCAGGATACGGC GCGCGCCAAAGAGATTCTGGGTGCCACCGCGACGCTGGAATTCCGTCTGGTGAACACCAGCGTGGATCCGACTGCGGCGG CCAGTGGCCGTGTACCGGGTGACTCTGAAGTTAAAGACATGCGTGATGGCCAGCCGGTCGTGCTTTACAAGCGGGTGATC CTGACCGGTGACCATATCACCGACTCAACCTCCAGCATGGATGAGTACAACCAGCCACAGGTGAACATTTCACTGGATGG CGCAGGCGGTAACATCATGTCCAACTTCACCAAGGACAATATCGGCAAGCCGATGGCGACCCTGTTTGTGGAGTACAAGG ACAGCGGTAAGAAAGATGCCAATGGCCGTTCCATTCTGGTGAAGCAGGAAGAGGTGATTAACGTCGCCAATATCCAGTCT CGCCTGGGGAACAGCTTCCGCATCACCGGTATCAACAACCCGAACGAAGCGCGTCAGCTGTCGCTGCTGCTGCGTGCCGG TGCGTTGATTGCGCCGATCCAGATTGTGGAAGAGCGTACTATCGGGCCGACCATGGGTCAGCAGAACATTACTCAGGGTC TGGAAGCCTGCCTGTGGGGTCTGCTTGCCTCGATCCTGTTTATGGTGGTGTTCTATAAGAAGTTTGGTCTGATTGCGACG AGTGCACTGCTGGTGAACCTGGTGCTGATTGTCGGCATCATGTCCCTGCTGCCGGGCGCGACCCTGACCATGCCGGGTAT TGCCGGTATCGTGTTAACGCTGGCGGTGGCAGTCGATGCCAACGTACTGATTAACGAACGTATTAAAGAAGAGCTGCGAA ACGGGCGCTCGGTTCAGCAGGCAATTCATGAGGGCTACAAAGGCGCCTTCTCCAGTATTGTCGATGCGAACGTAACCACC CTGATCAAAGTTATCATTCTTTACGCGGTCGGCACCGGTTCGATCAAAGGCTTTGCGATTACCACCGCAATTGGTATCGC GACCTCAATGTTCACCGCGATTATCGGTACCCGTGCCATTGTTAACCTGGTTTACGGTGGCAAACGCATCAACAAGCTGT CTATCTGA Protein sequence : MLNRYPLWKYVMLVVVILVGLLYALPNLYGEDPAVQITGARGSAASEQTLDQIQSALKQDNIQSKSVALENGAITARFAN TDVQLRAREAIMKALGENYVVALNLAPATPRWLTMLSAEPMKLGLDLRGGVHFLMEVDMDTALSKLQEQNADTLRSDLRT KNIPYTNVNKIANYGVEIRFRDAASRDAAISWLSSRHQDLVINSSGSDALRATMSDARLSEAREYAVQQNITILRNRVNQ LGVAEPLVQRQGSDRIVVELPGIQDTARAKEILGATATLEFRLVNTSVDPTAAASGRVPGDSEVKDMRDGQPVVLYKRVI LTGDHITDSTSSMDEYNQPQVNISLDGAGGNIMSNFTKDNIGKPMATLFVEYKDSGKKDANGRSILVKQEEVINVANIQS RLGNSFRITGINNPNEARQLSLLLRAGALIAPIQIVEERTIGPTMGQQNITQGLEACLWGLLASILFMVVFYKKFGLIAT SALLVNLVLIVGIMSLLPGATLTMPGIAGIVLTLAVAVDANVLINERIKEELRNGRSVQQAIHEGYKGAFSSIVDANVTT LIKVIILYAVGTGSIKGFAITTAIGIATSMFTAIIGTRAIVNLVYGGKRINKLSI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 9e-127 | 49 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 4e-127 | 49 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 8e-127 | 49 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 8e-127 | 49 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 8e-127 | 49 |
