Gene Information

Name : ybiS (Pvag_0613)
Accession : YP_003930264.1
Strain : Pantoea vagans C9-1
Genome accession: NC_014562
Putative virulence/resistance : Unknown
Product : protein erfK/srfK
Function : -
COG functional category : S : Function unknown
COG ID : COG1376
EC number : -
Position : 637222 - 638334 bp
Length : 1113 bp
Strand : -
Note : Uncharacterized protein conserved in bacteria

DNA sequence :
ATGAAAATTATTCGCGCTTTCGCTTCAATCGCTCTGGCTCTGGCGGCATTCAGCCAGTCAGCCTTTGCTGTGGTTTACCC
GTTACCGCCGGCCAACAGCCGTCTGATCGGGGAAAATATTGAAATTACGGTTCCTGAAGACAGCAAGCTGCCGCTGGAAG
CTTTTGCGGCGCAGTACCAGATGGGCCTCAGCAATATGCTGGAAGCCAATCCGGGTGTTGACGTTTATCTGCCTAAAGCT
GGCAGCAAAATGATCATCCCACAGCAGCTGATCCTGCCTGACGCACCGCGTGAAGGCATTGTGATTAACAGCGCAGAGAT
GCGTCTTTACTACTACCCAAAAGGCAGCAAAACCGTCGTGGTGTTGCCAATTGGTATCGGTGAGCTGGGTAAAGATACCC
CGATTAACTGGACCACAGCGGTAGAACGTAAGAAAGATGGCCCGACCTGGACGCCAACCAAAGGTATGCATGCGGACTAC
GCGGCACGCGGTGAAACGCTGCCAGCCGTGTTCCCGGCAGGCCCGGATAACCCGATGGGTCTTTACGCGCTCTATATCGG
TCGTCTCTATGCGATTCACGGCACCAACGCCAACTTCGGTATCGGCCTGCGCGTGAGCCACGGCTGTGTGCGTCTGCGCG
CTGACGATATTAAATGGCTGTATCAGAACGTGCCGGTCGGTACGCGCGTTCAATTCGTCGATCAGCCGGTAAAAGCGACC
GTAGAGCCAGACGGTTCACGTTATGTTGAAGTGCATAACCCGCTGTCGACTACGGAAGAGCAGTTCAACTCACGTGAACT
GGTGCCGATTACGCTGACGCAGGCAGTAAGCAAAGTGCTGGTTGATGCCAGCGTCAATCAGGATCAGGTTAACGGCGCCA
TTCAGGGCCGTACCGGTATGCCGGTAAAAGTGAACGGTGTGGAAAACAACATCCAGACTGCACCTGTACCAATGCCGGAA
AACCCGCAGGCTGCACCACAGGAACAGCCGATGACGCCAGTGACTCCACAGGGTGCAAACAGTGATGCTGCACAGCCACA
GCAGCCCGCCACTGAGCAGGCCGCACCGGTCACACCAGCAGCCCCTGCAGCCGCGGCCAATACCAACTCGTAA

Protein sequence :
MKIIRAFASIALALAAFSQSAFAVVYPLPPANSRLIGENIEITVPEDSKLPLEAFAAQYQMGLSNMLEANPGVDVYLPKA
GSKMIIPQQLILPDAPREGIVINSAEMRLYYYPKGSKTVVVLPIGIGELGKDTPINWTTAVERKKDGPTWTPTKGMHADY
AARGETLPAVFPAGPDNPMGLYALYIGRLYAIHGTNANFGIGLRVSHGCVRLRADDIKWLYQNVPVGTRVQFVDQPVKAT
VEPDGSRYVEVHNPLSTTEEQFNSRELVPITLTQAVSKVLVDASVNQDQVNGAIQGRTGMPVKVNGVENNIQTAPVPMPE
NPQAAPQEQPMTPVTPQGANSDAAQPQQPATEQAAPVTPAAPAAAANTNS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
erfK YP_853091.1 hypothetical protein Not tested PAI IV APEC-O1 Protein 6e-90 62