Gene Information

Name : cspD (Pvag_0715)
Accession : YP_003930366.1
Strain : Pantoea vagans C9-1
Genome accession: NC_014562
Putative virulence/resistance : Unknown
Product : cold shock-like protein cspD
Function : -
COG functional category : K : Transcription
COG ID : COG1278
EC number : -
Position : 746085 - 746306 bp
Length : 222 bp
Strand : -
Note : cold shock proteins

DNA sequence :
ATGGAGACGGGCACAGTTAAATGGTTCAATAATTCCAAAGGCTTTGGCTTTATCTGTCCGGTTGGCGGTGGCGACGATAT
TTTTGCACACTACTCCACCATCCAGATGGAAGGCTACCGCACGCTAAAGGCAGGCCAGCAGGTTCAGTTCGACGTTCATG
AAGGTCCGAAAGGCAATCACGCTAGCCTCATCGTGCCGGTTGAGATACAGGCCGTGGCGTGA

Protein sequence :
METGTVKWFNNSKGFGFICPVGGGDDIFAHYSTIQMEGYRTLKAGQQVQFDVHEGPKGNHASLIVPVEIQAVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18076.1 unknown Not tested TTSS locus Protein 1e-14 51