|
Name : iscS (CLOST_1494) Accession : YP_003936519.1 Strain : Clostridium sticklandii DSM 519 Genome accession: NC_014614 Putative virulence/resistance : Unknown Product : cysteine desulfurase (tRNA sulfurtransferase), PLP-dependent Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG1104 EC number : 2.8.1.7 Position : 1647106 - 1648302 bp Length : 1197 bp Strand : - Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 10393315, 10544286, 10600118, 10739946, 10781558, 10781607, 10829016, 10908675, 12549933, 12860127, 20068850, 20245547, 20347927, 21326031, 21576235, 86 DNA sequence : ATGGAGCAAAAAAGAGTTTATCTTGACAATGCAGCGACTACTCCGGTAAAAAAAGAAGTTCTAGATGCTATGATACCTTA CTTTACAAATAATTATGGAAACCCATCTAGTATACATTTCTTTGGCAGAGAGGTTAGAAAACCTGTAGATGAAGCTAGAG AAAAAGTAGCAAAGTTATTAGGGGCTGCAAGTAATGAAATATATTTTACTGCAGGTGGATCGGAATCGGATAACTGGGCA ATAAAAGGTGCAGCTTTTAAATTGATGAATAAAGGTAAGCATATAATAACAACTAAAATTGAGCACCATGCTGTGCTTCA CACTTGTGAATACTTAGAAAAAGAGCATGGATTTCAAATAACTTATTTAGATGTAAACAAGGATGGCTTAGTAGATTTAG ATAATTTTAAAAGTAATCTTAGAGATGATACAATTTTAGTTAGCATAATGTTTGCCAACAATGAAATTGGAACAATTCAG CCTATAAGAGAAATCGGCCAAATTTGTAAAGATAAAGGGATTGTTTTCCATACAGATGCAGTACAGGCAGTTGGGAATAT AAAAATTGATGTAAAAGAACTTAATATAGATATGCTATCACTTTCAGCTCATAAAATTTATGGGCCTAAAGGAATAGGTG CTCTTTATATTAAAAATGGAGTTAAGCTAGATAACTTAATCCATGGTGGAGCGCAGGAGCGTAAAAAAAGAGCTGGAACA GAAAACGTACCTGGAATTATAGGTCTTGGAAAAGCTTGTGAAATCGCAAATGATAATTTGGAGAGTCATATTTCTAAGCT TACTAATTTAAGAGAAAGACTTATGAATGGAATTTTAAATGAAATACCTCATACTATTGTAACAGGAAGTAGAGAAAGTA GACTACCTGGAACTGCAAGTTTTTGTTTTAAGTTTATAGAAGGTGAGGCTTTGCTTCTGAGCTTAGATTTAGTTGGTATA GCAGGCTCGAGTGGTTCAGCTTGTACATCTGGTTCACTTGACCCTTCTCATGTGCTTATGGCACTTGGACTTACTCATGA GATAGCTCATGGATCTTTACGACTTAGCTTATCAGATTTTACAACGGAAGAGGAAGTTGATTACGTAATTGAGAAGCTTC CGCCGATTATCGATAGACTTAGAAAAATGTCACCATTATATGAAGATTTTTTGAAGGGAGAATCAGTTAATGTATAG Protein sequence : MEQKRVYLDNAATTPVKKEVLDAMIPYFTNNYGNPSSIHFFGREVRKPVDEAREKVAKLLGAASNEIYFTAGGSESDNWA IKGAAFKLMNKGKHIITTKIEHHAVLHTCEYLEKEHGFQITYLDVNKDGLVDLDNFKSNLRDDTILVSIMFANNEIGTIQ PIREIGQICKDKGIVFHTDAVQAVGNIKIDVKELNIDMLSLSAHKIYGPKGIGALYIKNGVKLDNLIHGGAQERKKRAGT ENVPGIIGLGKACEIANDNLESHISKLTNLRERLMNGILNEIPHTIVTGSRESRLPGTASFCFKFIEGEALLLSLDLVGI AGSSGSACTSGSLDPSHVLMALGLTHEIAHGSLRLSLSDFTTEEEVDYVIEKLPPIIDRLRKMSPLYEDFLKGESVNV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAT96060.1 | cysteine desulfurase | Not tested | T-PAI | Protein | 7e-72 | 45 |
