Gene Information

Name : yvrO (CLOST_0213)
Accession : YP_003935248.1
Strain : Clostridium sticklandii DSM 519
Genome accession: NC_014614
Putative virulence/resistance : Resistance
Product : putative ABC transporter (ATP-binding protein)
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 249525 - 250229 bp
Length : 705 bp
Strand : +
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type pt : putative transporter

DNA sequence : 
ATGAATACGCTTATCAAGGGTGTAAATGTCTCTAAGATTTATAAAATGGGAGAAGTGGATATAAGGGCGCTGTCAGAAAT
TGATTTTGAAATTTATGACTGTGAATTTCTCGTTCTGCTTGGACCATCTGGTTCAGGAAAAAGTACATTACTGAATATCG
TAGGAGGAATGGACTCTCTTACTTCAGGGGAGTTGTATTATAAAGGCAAGCCTATTCACAACGGGGGAAAGAAGCTTCTT
ACTGAGTATAGAAGAGATGCAGTTGGATTTGTATTTCAGTTCTATAACCTCATGCCAAATTTAACTGCGCTTGAGAATGT
GGATCTTGCAAGAGAGATTTCCTCAAGTCCGCTAGATTCAAAGGATATGCTTGAAAAAGTAGGGCTACTGGATAGAAAAG
ACCATTTTCCATCTCAGCTATCAGGTGGCCAGCAGCAAAGAGTTGCTATAGCGAGGGCACTTGCAAAGAATCCTGAAATC
CTGCTTTGTGATGAGCCTACAGGAGCTCTTGATTCAGTTTCTAGCAGAGAAGTCATTCGCATACTTAAGGAATTTTCCAG
AAGCTTTGAAAAAACAGTTATAGTTATCACTCACAATGCATCCATAGCTCAGACAGCTGATAGGGTTATGTATATAAAGG
ATGGAAAGATTGAAAAGGTAGAGGTAAATAAAAATCCTATACCTGTAGAGGAGATAGTGCTATGA

Protein sequence : 
MNTLIKGVNVSKIYKMGEVDIRALSEIDFEIYDCEFLVLLGPSGSGKSTLLNIVGGMDSLTSGELYYKGKPIHNGGKKLL
TEYRRDAVGFVFQFYNLMPNLTALENVDLAREISSSPLDSKDMLEKVGLLDRKDHFPSQLSGGQQQRVAIARALAKNPEI
LLCDEPTGALDSVSSREVIRILKEFSRSFEKTVIVITHNASIAQTADRVMYIKDGKIEKVEVNKNPIPVEEIVL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-32 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yvrO YP_003935248.1 putative ABC transporter (ATP-binding protein) NC_012469.1.7685735. Protein 3e-51 50
yvrO YP_003935248.1 putative ABC transporter (ATP-binding protein) CP001581.1.gene798.p Protein 3e-40 46
yvrO YP_003935248.1 putative ABC transporter (ATP-binding protein) CP001581.1.gene598.p Protein 1e-36 44
yvrO YP_003935248.1 putative ABC transporter (ATP-binding protein) NC_012469.1.7686878. Protein 2e-39 43