Gene Information

Name : cchA (CLOST_0676)
Accession : YP_003935707.1
Strain : Clostridium sticklandii DSM 519
Genome accession: NC_014614
Putative virulence/resistance : Virulence
Product : putative carboxysome-like ethanolaminosome structural protein, ethanolamine utilization protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4577
EC number : -
Position : 807909 - 808181 bp
Length : 273 bp
Strand : +
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type ps : putative structure

DNA sequence :
ATGAAAGCATTAGGAATAATTGAAACAAGAGGATTGGTTGCACTTATAGAGGCTACGGATGCTATGATAAAATCTGCAAA
TGTAGAAGTAGTGGGAACAGAAAAAATAGGTTCAGGACTTGTATCTGTAGTAGTACAAGGAGAAGTAGGAGCAGTAAAGG
CAGCTGTTGAAGCTGGAGCTGAAAGTGCTCAAAGATTAGGTGAGGTTGTGGCAGTTCATGTAATTCCTAGACCATCAATG
GGACTTGAGCAATTACTACCTGCAATTAAGTAG

Protein sequence :
MKALGIIETRGLVALIEATDAMIKSANVEVVGTEKIGSGLVSVVVQGEVGAVKAAVEAGAESAQRLGEVVAVHVIPRPSM
GLEQLLPAIK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 9e-06 62
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 2e-07 60
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 2e-07 58

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cchA YP_003935707.1 putative carboxysome-like ethanolaminosome structural protein, ethanolamine utilization protein VFG1598 Protein 4e-06 62
cchA YP_003935707.1 putative carboxysome-like ethanolaminosome structural protein, ethanolamine utilization protein VFG1597 Protein 8e-08 60
cchA YP_003935707.1 putative carboxysome-like ethanolaminosome structural protein, ethanolamine utilization protein VFG1596 Protein 1e-07 58