Gene Information

Name : cchA (CLOST_0678)
Accession : YP_003935709.1
Strain : Clostridium sticklandii DSM 519
Genome accession: NC_014614
Putative virulence/resistance : Virulence
Product : putative carboxysome-like ethanolaminosome structural protein, ethanolamine utilization protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4577
EC number : -
Position : 808545 - 808817 bp
Length : 273 bp
Strand : +
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Product type ps : putative structure

DNA sequence :
ATGGAAGCTTTAGGAATGATAGAAACTAGAGGATTAACTGCAGCAGTTGAAGCGGCAGATACAATGCTAAAAGCAGCAGA
TGTAAAGGTGATTGGAACTGAGAAAATAGGCTCTGGCCTAGTTACGATAGTAGTGCAAGGAGATGTAGGAGCAGTAAAAG
CAGCGGTAGAAGCTGGAGCTGAGAGTGCTCAAAGATTAGGAGAAGTAGTAGCTGTCCATGTAATACCTAGACCATCTGAG
GATGTAAAAAAGGTATTACCTATAATAGGATAG

Protein sequence :
MEALGMIETRGLTAAVEAADTMLKAADVKVIGTEKIGSGLVTIVVQGDVGAVKAAVEAGAESAQRLGEVVAVHVIPRPSE
DVKKVLPIIG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 3e-14 63
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 6e-14 62
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 2e-13 60

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cchA YP_003935709.1 putative carboxysome-like ethanolaminosome structural protein, ethanolamine utilization protein VFG1597 Protein 1e-14 63
cchA YP_003935709.1 putative carboxysome-like ethanolaminosome structural protein, ethanolamine utilization protein VFG1596 Protein 3e-14 62
cchA YP_003935709.1 putative carboxysome-like ethanolaminosome structural protein, ethanolamine utilization protein VFG1598 Protein 1e-13 60