Gene Information

Name : STAUR_2942 (STAUR_2942)
Accession : YP_003952561.1
Strain : Stigmatella aurantiaca DW4/3-1
Genome accession: NC_014623
Putative virulence/resistance : Resistance
Product : macrolide efflux ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3558537 - 3559220 bp
Length : 684 bp
Strand : -
Note : -

DNA sequence : 
GTGGTCATCCGGGTCGAAGCCCTGAGCAAGAACTACCGGGTGGGCTCGGAGACCGTGCACGCCCTGCGAGGGGTCAACCT
GGAGATCCGGCGCAATGAATATGTGGCCGTCATGGGCCCGTCTGGCTCGGGCAAGTCCACCTTCATGAACCTCATCGGCT
GCCTCGACATCCCCAGCGGAGGACAATACTGGCTCAACGGCCAGCCGGTGGCGGGCATGGACGAGTCGGCGCTGGCGCGA
ATCCGCAACCGGGAGATCGGCTTCGTCTTCCAGAGCTTCAACCTGCTGCCCCGCGCCAGCGCGCTGGACAACGTGGCCCT
GCCGCTCGTGTACTCGGGCGTGAAGAAGCGGCTCCGGCGCGAGCGCGCCGCGCTGATGCTGGAGCGGGTCGGCCTGGGCG
CCCGCAAGGACCACCGCCCCAACGAGCTGTCCGGTGGTCAGCGGCAGCGCGTGGCCATCGCCCGCGCCCTCGTCACCCAG
CCAGCCCTGCTGCTGGCGGACGAGCCCACGGGCGCGCTCGACAGCCGGACGGGAGAAGAGATCATGGCGCTCTTTGGAGA
GCTGCACACGCAAGGGCAGACCCTCATGCTGGTCACCCACGAGCCCGACATCGCGGAGCACGCGAAGCGGATCCTCTACC
TCAAGGATGGCGTGATCGAACGGGACAACCGGAGGACGCCGTGA

Protein sequence : 
MVIRVEALSKNYRVGSETVHALRGVNLEIRRNEYVAVMGPSGSGKSTFMNLIGCLDIPSGGQYWLNGQPVAGMDESALAR
IRNREIGFVFQSFNLLPRASALDNVALPLVYSGVKKRLRRERAALMLERVGLGARKDHRPNELSGGQRQRVAIARALVTQ
PALLLADEPTGALDSRTGEEIMALFGELHTQGQTLMLVTHEPDIAEHAKRILYLKDGVIERDNRRTP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-29 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STAUR_2942 YP_003952561.1 macrolide efflux ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 3e-57 54
STAUR_2942 YP_003952561.1 macrolide efflux ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 1e-48 52
STAUR_2942 YP_003952561.1 macrolide efflux ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 1e-38 42