|
Name : glcD (AXYL_01911) Accession : YP_003977959.1 Strain : Achromobacter xylosoxidans A8 Genome accession: NC_014640 Putative virulence/resistance : Unknown Product : glycolate oxidase subunit GlcD Function : - COG functional category : C : Energy production and conversion COG ID : COG0277 EC number : 1.1.3.15 Position : 2033444 - 2034997 bp Length : 1554 bp Strand : + Note : - DNA sequence : ATGCGGGTAAATCCCGGTCTGCTAGTGACGGGTGCTCGCGCTATTGTTGCGCTCATGAATTCTTTGGTCGAAACCGGCCT GGCACAAGTGCAGGCGCCTTATTCTTTGCAGCAGCTCATCGAGGCGTTGTCGGCCGTGTTGCCCGCGCACTGCGTGTTGT TCCGCGAAGAGGATACGCGCCCCTACGAGTGCGACGGCCTATCCCTGTATCGCGCGCTGCCTGCGGTCGTTGCCCTGCCC GAAACGGAAGAACAGGTGCAGGCCGTCATGCGCATCTGCAAACGCCTGAATGCGCCCGTGGTCGCGCGCGGGGCCGGCAC CGGCTTGTCCGGCGGCGCCATGCCGCACAGCCGCGGCGTGCTGCTCGGCTTGTCCAAGTTCAATCGCATCAAGCACATAG ACCTGGCCAGCGCCACGGCCATCGTGCAGCCCGGCGTGCGCAATCTGGCGATCTCCGAGGCGGCCGCGCCTTACGGCCTG TACTACGCGCCCGACCCCTCCAGCCAGATCGCCTGTTCCATCGGCGGCAACGTGGCGGAGAACTCCGGCGGCGTGCATTG CCTGAAGTACGGGCTGACCGTGCACAACGTGCTGCGCGTGCGGGTCGTGACCATCGACGGCGAGGTGGTGGAGTTGGGCT CCGAGGCGCCCGATGCACCGGGCCTGGACCTGCTGTCGGTCTTCATCGGTTCGGAAGGCATGCTGGGCGTGGTCACTGAG GTGACGGTCAAACTGATCCCCAAGCCGGCTTGCGCGCAGGTCGTCATGGCCAGCTTTTCCAGCGTCGAAGCGGCGGGCAA CGCGGTCACCCAGGTGATCGCGGCCGGCATGATCCCGGCAGGCCTGGAGATGATGGACCGCCGCGCGACGCACATGGTCG AACCCTTTGTGCGCGCTGGCTACGACATGGACGCGCAAGCCATCCTGCTGTGCGAATCGGACGGCACGCCCGAAGAGGTC GAGCACGAGATCGCGCGCATGGAGGCCGTGTTCCGCGAGGCCGGAGCCACGCGCTGCCAGGTCTCGTCGTCAGAGGCCGA GCGCCTGAAGTTCTGGGCCGGCCGCAAGAACGCCTTCCCGGCCGCGGGGCGCGTATCGCCCGATTACTATTGCATGGACG GCACGATACCGCGCCGCCATCTGGCGCGCGTGCTGGGCGCCATAGAACAGATGGAAGACGAATTCAGCCTGCGCTGCGCC AACGTCTTTCACGCAGGCGACGGCAACCTGCATCCGTTGATTCTGTTCGATTCAAACAAGCCGGACGAGGTGGAGCGTGC CGAGAAATTCGGCGCCGCCATACTTGAGCTGTGCGTGCAGGTAGGAGGGACCGTGACCGGAGAGCACGGTGTGGGTATGG AGAAAATAAATCAAATGTGCGTGCAATTCTCTCGCGAAGAACTCGACGCGTTTCTGGCGGTCAAGCGGGCTTTCGATCCG CCCTGCCTGCTCAATCCTGAAAAAGTCATCCCCACGCTGGCCCGCTGCGCCGAATACGGCAAGATGCATGTCCATGCGGG AGAATTGCGCTTCCCCGATCTCGCCCGTTTCTAG Protein sequence : MRVNPGLLVTGARAIVALMNSLVETGLAQVQAPYSLQQLIEALSAVLPAHCVLFREEDTRPYECDGLSLYRALPAVVALP ETEEQVQAVMRICKRLNAPVVARGAGTGLSGGAMPHSRGVLLGLSKFNRIKHIDLASATAIVQPGVRNLAISEAAAPYGL YYAPDPSSQIACSIGGNVAENSGGVHCLKYGLTVHNVLRVRVVTIDGEVVELGSEAPDAPGLDLLSVFIGSEGMLGVVTE VTVKLIPKPACAQVVMASFSSVEAAGNAVTQVIAAGMIPAGLEMMDRRATHMVEPFVRAGYDMDAQAILLCESDGTPEEV EHEIARMEAVFREAGATRCQVSSSEAERLKFWAGRKNAFPAAGRVSPDYYCMDGTIPRRHLARVLGAIEQMEDEFSLRCA NVFHAGDGNLHPLILFDSNKPDEVERAEKFGAAILELCVQVGGTVTGEHGVGMEKINQMCVQFSREELDAFLAVKRAFDP PCLLNPEKVIPTLARCAEYGKMHVHAGELRFPDLARF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcD | CAE85245.1 | GlcD protein | Not tested | PAI V 536 | Protein | 3e-142 | 62 |
