|
Name : secD (AXYL_05153) Accession : YP_003981174.1 Strain : Achromobacter xylosoxidans A8 Genome accession: NC_014640 Putative virulence/resistance : Unknown Product : protein-export membrane protein SecD Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0342 EC number : - Position : 5526761 - 5528641 bp Length : 1881 bp Strand : + Note : - DNA sequence : ATGAACCGCTATCCCCTCTGGAAGTACATTACGGTCCTGGTCGCGGTCATCATCGGCCTGCTGTACACGCTTCCCAACTT CTACGGCGAGTCCCCGGCCGTCCAGGTTTCCAGCGCCAAGGCCACGATCAAGGTCGATCCAGCCATGCTGAACCGGGTCG ATCAGATCCTGACCGACGCCAAGATCCCCAATGAAGGGGTCTACTACGAACAAAACGGCACGCTCGGCACCGTGCGCGCC CGCTTTACGTCGACCGACCTGCAGTTGCAGGCGCGCGACCTCATCGACAGATCCCTCAACACCGTCGCCGGCGACCCCCA CTACACGGTCGCGCTGAACCTGCTGCCCGCCTCGCCCGCCTGGATGCGCGCCCTGGGCTGGTTCGCGCCCAAGCCCATGT ACCTGGGCCTGGACCTGCGCGGCGGCGTGCACTTCCTGCTGCAAGTGGACATGCAGGGCGCCCTGACCGCCCGCTATGAC TCCCTGGCCGCCGACGTGCGTTCGGTGCTGCGCGACCAGAAGGTCAACGTGGCCGGCGTCGAACGCTCGGGTCTGGCCAT TGCCGCCACCTTCGCCAACGCGGACGACCGCGACCGCGCCATTTCCACCCTGCGCAGCCGCCTGCCCGACCTGGAATTCA CTGAACGCGAAGAGAACGGCAAGCCGCTGCTGATGGCCGCCCTGAACCCGGCCGCCGTCACCCGCGTGCAGGATTCCGCG CTCAAGCAGAACATCAACACGCTGCACAACCGCATCAACGAACTGGGCGTGGCCGAACCTGTCATCCAGCAACAGGGCGC CGACCGCATCGTGGTCCAGCTGCCCGGCGTGCAGGACGTGGCCAAGGCCAAGGAACTGCTGGGCCGCACCGCCACGCTGG AAATCCGCATGGTCGACGACACCCCCGCCGCGCAAGCCGCGCTGCTGGGCGGCAGCGTGCCGTTCGGTCTCGAACGCTAC AACGACCGCGACGGCCGTCCCATCCTGGTGCGCCGCCAGGTCATCCTGACCGGCGAAAACCTGCAGGACGCCCAGCCCGG CCGCGACTCGCAGACCCAGCAGGCCGCCGTCCACCTGACGCTGGATTCCAAGGGCGCCCGCATCTTCCGCGACGTCACCC GCGACAACATCGGCAAGCGCATGGCCATCCTGCTGTTTGAAAACGGCAAGGGCGAAGTGGTCACGGCCCCGGTCATCCGC GGCGAAATCGCCGGCGGCCAGGTGCAGATCTCGGGCAGCATGAGCTCCGAGGAAGCCGCCGACACCGCGCTGCTGTTGCG CGCCGGCGCCTTGGCTGCGCCCATGTCCATCATCGAGGAACGCACCATCGGCCCGAGCCTGGGCGCGGACAACATCGCCA AGGGCTTCTACTCGACGCTGTACGGCTTCCTGGCCATCGCCGTCTTCATCATCCTGTACTACCACCTGTTTGGCGTGTTC TCGACCATCGGCCTGACCATGAACGTGCTGCTGCTGCTGGCGCTGCTGTCCATGCTGCAGGCCACGCTGACCCTGCCGGG CATCGCGGCAATCGCGCTGACGCTGGGCATGGCCATCGACTCGAACGTGCTGATCAACGAGCGGATACGCGAGGAACTGC GCGCGGGCGCCAGTCCGCAGCAGGCCATCCATCACGGCTTCGAACGCGCCTGGGGCACCATTCTCGACTCGAACCTCACC ACGCTGATCGTGGGCCTGGCGCTGCTGGCCTTCGGTTCGGGCCCGATCCGCGGCTTCGCCGTGGTGCACGTCCTGGGCAT CCTGACCTCGATGTTCTCGTCGGTGGTGGGCGTACGCGCGCTGGCCAACCTCTGGTATGGCCGCAAGAAGAAGCTCACGT CGATCTCCATCGGTGAAGTCTGGAAACCGAAGACCAACTGA Protein sequence : MNRYPLWKYITVLVAVIIGLLYTLPNFYGESPAVQVSSAKATIKVDPAMLNRVDQILTDAKIPNEGVYYEQNGTLGTVRA RFTSTDLQLQARDLIDRSLNTVAGDPHYTVALNLLPASPAWMRALGWFAPKPMYLGLDLRGGVHFLLQVDMQGALTARYD SLAADVRSVLRDQKVNVAGVERSGLAIAATFANADDRDRAISTLRSRLPDLEFTEREENGKPLLMAALNPAAVTRVQDSA LKQNINTLHNRINELGVAEPVIQQQGADRIVVQLPGVQDVAKAKELLGRTATLEIRMVDDTPAAQAALLGGSVPFGLERY NDRDGRPILVRRQVILTGENLQDAQPGRDSQTQQAAVHLTLDSKGARIFRDVTRDNIGKRMAILLFENGKGEVVTAPVIR GEIAGGQVQISGSMSSEEAADTALLLRAGALAAPMSIIEERTIGPSLGADNIAKGFYSTLYGFLAIAVFIILYYHLFGVF STIGLTMNVLLLLALLSMLQATLTLPGIAAIALTLGMAIDSNVLINERIREELRAGASPQQAIHHGFERAWGTILDSNLT TLIVGLALLAFGSGPIRGFAVVHVLGILTSMFSSVVGVRALANLWYGRKKKLTSISIGEVWKPKTN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 5e-98 | 43 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 9e-98 | 43 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 2e-98 | 43 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 2e-98 | 43 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 2e-98 | 43 |
