Gene Information

Name : clpB3 (AXYL_06389)
Accession : YP_003982397.1
Strain : Achromobacter xylosoxidans A8
Genome accession: NC_014640
Putative virulence/resistance : Virulence
Product : chaperone protein ClpB
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 6868519 - 6871128 bp
Length : 2610 bp
Strand : -
Note : -

DNA sequence :
ATGTCGGATATCGGCCGCATCGACCTCTTCGGAAAGCTCAATCCGCTGCTCTACCAGACGCTGGAGGGCGCCACCGCGTT
CTGCAAGCTGCGCGGCAATCCCTATGTGGAACTGGTGCATTGGGTGCATCAGATCCTGCATGCGCAAGACAGCGACCTGC
ACCGGATTGCGCGCCGCTTCGGACTGGACATGGCGGCATTGCAAGCCGACCTGACGGCGGAGCTGGACCGCCTGCCGGCC
GGGGCGGGTTCGGTGTCCGATCTGTCCGAACACATTGATCACGCAGTCGAAAGGGCCTGGGTGTTGGGGTCGCTGCGCTA
TGGCGCGGCACGCATCCGCAGCGCCCATCTGCTGGCGGGACTGGCGCGGACCTACGCGCTGCGCCACGTGCTGCTGGGCA
TGTCGGCGCAGTTCTCGCGCATCGTGCCGGATACGCTGCTGGAACAGCTGCAAGAGATCGTGCAGGGCTCGCCGGAAGAC
GCGGCCGAGGCGGCGTCCGTTGCCGCCGCCGGGGCGCCGGGCGAGGGCGGTTCCGCGCTTGCGCGCTTCGCGGTCGATCT
GACCGCTCGCGCGCGCGCGGGCGAGATCGATCCGGTATCCGGACGCGACGAGGAAATCCGCCAGCTCATCGATGTGCTGA
TGCGGCGGCGCCAGAACAACCCGCTACTGGCCGGCGAGGCCGGCGTCGGCAAGACGGCCGTGGTGGAAGGCCTGGCGCTG
CGCCTGGCGGCGGGAGAGGTGCCACCGCAGCTGCGCGACGTTGCGCTGTATCTGCTGGACATCGGCCTGTTGCAGGCGGG
CGCGGGCGTGAAGGGCGAGTTCGAGCAACGGCTGCGCGGCGTCATAGACGAGGTGCAGGCCAGCGAGCGGCCGGTGGTGC
TGTTCATCGACGAGATCCACACGCTGGTGGGCGCAGGCGGCGCCGCGGGCACAGGGGACGCGGCCAACCTGTTGAAGCCT
GCGCTGGCGCGCGGCCAGCTGCGCACCATAGGCGCCACCACCTGGTCGGAATACAAGAAGTACATCGAGAAGGACCCCGC
GCTGAGCCGCCGCTTCCAGGTCGTCCAGGTGCACGAGCCCGACGAGGCGCGTGCATTCGGCATGCTGCGGGGCCTGGCTG
AAACGCTGCAGGCCCATCATGGCGTGCTGCTGCTGGACGAGGCGATCGAGGCGGCGGTGACCTTGTCGCATCGCTATATT
CCCGCGCGCCAGCTGCCTGACAAGGCGGTGGCGCTGCTGGACACGGCCTGCGCGCGCGTCGCGGTCAGCCAGCATGCGGT
GCCGCCCAGCCTGGAGGACGCGCGCAGGCGGGTCCAGGCACTGGAGTTGGCGCAGCGCATCGCCGAACGTGAACTGCGCC
TGGGCGAAGGCGACGCGCAGCGGATCCAGCGCCTGGCGGCCGAGCAGGCCGGCGCCGCGGACGATGAGCGGACGCTGGCG
GCGCGCTGGGAGTCGGAACGTGCGTTGGCCGGGCATGTGCTGACATTGCGCAAGACGCTGGACCTTGCTGCGTCCGATGC
GCAGGAAGACCAGCGCCGCGCGTTGGCGCAGGCGCGCGTAGCGCTGGCGGCCAGCCAGGGCGAGACGGCGATGGTGCATT
GCGCGGTCGACGCGGCGGCGGTCGCGGCGGTGGTGGCCGACTGGACCGGCATCCCCGTGGGCCGCATGCTGCGGGACGAG
GCGCGCGCCGTGCTGGATCTGGCGGATACGCTGTCGACGCGGGTGATCGGCCAGCGCGAAGCGCTGGAGGCGGTGGCGCG
CCGGGTCCAGACCTCTCGTGCCGGCTTGACCGACCCGGACAAGCCGGTGGGCGTGTTCCTGCTCTGCGGCCCCAGCGGCG
TCGGCAAGACGGAGACCGCGCTGGCCCTGGCCGAAGCGCTCTACGGTGGCGAGCAGAACCTGATCACGATCAACATGAGC
GAGTTCCAGGAGTCGCATACGGTGTCCACGCTCAAGGGCGCGCCGCCTGGATACGTGGGCTATGGCGAGGGCGGCGTGCT
GACCGAGGCGGTGCGCAGGCGGCCCTACAGCGTGGTGCTGCTGGACGAGGTGGAGAAGGCGCACGCCGACGTGCATGAGA
TCTTCTTCCAGGTCTTCGACAAGGGCTGGATGGAGGACGGCGAGGGGCGCTACATCGATTTCCGCAACGCGGTGATCATC
CTGACCTCCAACGTGGGTGCGGACCGCATCGCGGCGCTGTGCCGCGACCCGGAGCTGTTGCCGGACAGCGTCGCGTTGGC
CGCGGCATTGCGCGAGCAGCTGCTGCAGGCCTTTCCGGCCGCTCTGCTGGGGCGGTTGGTCGCGGTGCCGTACCTGCCGT
TGCCGGACACCATGCTGGCACGCATCGTGGACCTGCAATTCGAGCGCGTGCGCCGCCGCCTGTCGGAGCACCACGGCATC
GTGCTGGAGGTGACGCCCGAAGCCACCGCGCTGGTCGTGGCGCGATGCGCCGAAGTGGAGTCGGGGGCGCGCATGGTGGA
TGCCGTGCTCACCAACACGGTGCTGCCCAGGATCAGCCGGGAGCTGCTGGGCGCTTCGATGCAGGACCGCAGGCTGAGCA
GGGTAGGCCTGTCAGCCGCCGACGGGGAGTTCCGTTATGACTACGCCTGA

Protein sequence :
MSDIGRIDLFGKLNPLLYQTLEGATAFCKLRGNPYVELVHWVHQILHAQDSDLHRIARRFGLDMAALQADLTAELDRLPA
GAGSVSDLSEHIDHAVERAWVLGSLRYGAARIRSAHLLAGLARTYALRHVLLGMSAQFSRIVPDTLLEQLQEIVQGSPED
AAEAASVAAAGAPGEGGSALARFAVDLTARARAGEIDPVSGRDEEIRQLIDVLMRRRQNNPLLAGEAGVGKTAVVEGLAL
RLAAGEVPPQLRDVALYLLDIGLLQAGAGVKGEFEQRLRGVIDEVQASERPVVLFIDEIHTLVGAGGAAGTGDAANLLKP
ALARGQLRTIGATTWSEYKKYIEKDPALSRRFQVVQVHEPDEARAFGMLRGLAETLQAHHGVLLLDEAIEAAVTLSHRYI
PARQLPDKAVALLDTACARVAVSQHAVPPSLEDARRRVQALELAQRIAERELRLGEGDAQRIQRLAAEQAGAADDERTLA
ARWESERALAGHVLTLRKTLDLAASDAQEDQRRALAQARVALAASQGETAMVHCAVDAAAVAAVVADWTGIPVGRMLRDE
ARAVLDLADTLSTRVIGQREALEAVARRVQTSRAGLTDPDKPVGVFLLCGPSGVGKTETALALAEALYGGEQNLITINMS
EFQESHTVSTLKGAPPGYVGYGEGGVLTEAVRRRPYSVVLLDEVEKAHADVHEIFFQVFDKGWMEDGEGRYIDFRNAVII
LTSNVGADRIAALCRDPELLPDSVALAAALREQLLQAFPAALLGRLVAVPYLPLPDTMLARIVDLQFERVRRRLSEHHGI
VLEVTPEATALVVARCAEVESGARMVDAVLTNTVLPRISRELLGASMQDRRLSRVGLSAADGEFRYDYA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 0.0 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
clpB3 YP_003982397.1 chaperone protein ClpB VFG2076 Protein 0.0 60
clpB3 YP_003982397.1 chaperone protein ClpB VFG2084 Protein 7e-131 42
clpB3 YP_003982397.1 chaperone protein ClpB VFG0079 Protein 4e-86 42