Gene Information

Name : HMPREF0733_11083 (HMPREF0733_11083)
Accession : YP_003983974.1
Strain : Rothia dentocariosa ATCC 17931
Genome accession: NC_014643
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : 3.6.3.-
Position : 1161189 - 1161947 bp
Length : 759 bp
Strand : +
Note : COG: COG1136; Pfam: PF00005; InterPro: IPR003593

DNA sequence : 
ATGACTACTACAGAAGCCAGCACTGAAACTCCAGCGGTGTCCACCAAAAACCTGTTCAAAACCTACGGTCGGGGTGAGGC
AACTGTACACGCCCTGAATAATGTCACTATTGATTTTGAGCGGGGTAAGTTCACCGCGATTATGGGTCCTTCGGGCTCGG
GTAAATCAACGCTGATGCAAACCCTCGCCACGCTGGATACTCCCGATCATATTCCAGAGACCAGCATCCGTATTGGTACC
ACCGAACTGTATGGGCAGAGGGATAACCAGCTGACCGAGTTCCGGCGTGAGCACGTGGGTTTTATCTTCCAGGCGTTTAA
CCTGGTGCCTACCCTGACCGCTGGGCAGAATATTGATTTGCCGCTGGGGTTGGCGGGTAAGAAGCCGGACCCGGCCTGGC
GTGAATATCTGGTCAAGACTCTCGGTCTGTCGGATCGGTTGGGTCATCGTCCCGAGCAGCTTTCAGGTGGTCAGCAGCAG
CGTGTTGCTATTGTACGTGCGCTGCTGTCGCGTCCGGAGGTGGTGTTTGCTGATGAGCCCACCGGTAACCTCGACTCAAA
TTCGGGTGCCGAGGTGCTCAGGCTATTGCGGGATGCCGCCACTGAGCAGAAGCAGACGATTCTGATGGTCACCCATGATG
CGCATGCTGCTTCGTATGCTGATCGTGTGGTGTTTTTAAAGGACGGTGCGATTGCTGGGGAGATGCTGAATCCTACGCAT
GATGCTGTGCTGCAGGCGATGGGGCAGCTGGAAGGGTAA

Protein sequence : 
MTTTEASTETPAVSTKNLFKTYGRGEATVHALNNVTIDFERGKFTAIMGPSGSGKSTLMQTLATLDTPDHIPETSIRIGT
TELYGQRDNQLTEFRREHVGFIFQAFNLVPTLTAGQNIDLPLGLAGKKPDPAWREYLVKTLGLSDRLGHRPEQLSGGQQQ
RVAIVRALLSRPEVVFADEPTGNLDSNSGAEVLRLLRDAATEQKQTILMVTHDAHAASYADRVVFLKDGAIAGEMLNPTH
DAVLQAMGQLEG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-35 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HMPREF0733_11083 YP_003983974.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 2e-44 47
HMPREF0733_11083 YP_003983974.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 3e-45 45
HMPREF0733_11083 YP_003983974.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 2e-43 44
HMPREF0733_11083 YP_003983974.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 1e-34 43